Results 61 - 68 of 68 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value![]() |
Predicted miRNA align pattern | |||||||
1595 | 5' | -59.1 | NC_001347.2 | + | 208076 | 0.66 | 0.8515 |
Target: 5'- uGCCG-CGUCGgguacCGCUGCCgcagaugggcgcACCGACGg -3' miRNA: 3'- -UGGCaGCGGCa----GUGACGG------------UGGCUGUa -5' |
|||||||
1595 | 5' | -59.1 | NC_001347.2 | + | 96396 | 0.66 | 0.8515 |
Target: 5'- gGCCGUgCGCa-UCGcCUGCCucauCCGACAg -3' miRNA: 3'- -UGGCA-GCGgcAGU-GACGGu---GGCUGUa -5' |
|||||||
1595 | 5' | -59.1 | NC_001347.2 | + | 4872 | 0.66 | 0.858214 |
Target: 5'- cGCCGUCGCaucgcccCGaggCGCUGCUcugaagccaaguGCCGACGg -3' miRNA: 3'- -UGGCAGCG-------GCa--GUGACGG------------UGGCUGUa -5' |
|||||||
1595 | 5' | -59.1 | NC_001347.2 | + | 127799 | 0.66 | 0.858951 |
Target: 5'- cACCGUCGCCGUaCACcccaGCguuuuacgCGCCGugGc -3' miRNA: 3'- -UGGCAGCGGCA-GUGa---CG--------GUGGCugUa -5' |
|||||||
1595 | 5' | -59.1 | NC_001347.2 | + | 222751 | 0.66 | 0.858951 |
Target: 5'- cGCUGcCGCgGcCAUUGCCGCCGcCGc -3' miRNA: 3'- -UGGCaGCGgCaGUGACGGUGGCuGUa -5' |
|||||||
1595 | 5' | -59.1 | NC_001347.2 | + | 85341 | 0.66 | 0.858951 |
Target: 5'- cGCCGccagCGCCGUCGCccgcgGCUagGCCGAgAc -3' miRNA: 3'- -UGGCa---GCGGCAGUGa----CGG--UGGCUgUa -5' |
|||||||
1595 | 5' | -59.1 | NC_001347.2 | + | 68050 | 0.66 | 0.866214 |
Target: 5'- cCCGcCGCCGcCACcGCCACCa---- -3' miRNA: 3'- uGGCaGCGGCaGUGaCGGUGGcugua -5' |
|||||||
1595 | 5' | -59.1 | NC_001347.2 | + | 103241 | 0.65 | 0.879479 |
Target: 5'- uGCCGacgagcCGCUGUUugUggacgauuaccguGCCACCGACGa -3' miRNA: 3'- -UGGCa-----GCGGCAGugA-------------CGGUGGCUGUa -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home