miRNA display CGI

Results 81 - 87 of 87 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
16215	3'	-63.8	NC_004065.1	+	202032	0.66	0.653633
	Target:  5'- -cGCC-CCCUCGCGggugaaACgCgGGGGACUGa -3' miRNA:   3'- uaCGGcGGGAGCGC------UG-GgCUCCUGGC- -5'
16215	3'	-63.8	NC_004065.1	+	202735	0.66	0.663064
	Target:  5'- -gGCCGUUucggCUCGUGuCCCGAGcGCCGu -3' miRNA:   3'- uaCGGCGG----GAGCGCuGGGCUCcUGGC- -5'
16215	3'	-63.8	NC_004065.1	+	203148	1.05	0.001716
	Target:  5'- cAUGCCGCCCUCGCGACCCGAGGACCGu -3' miRNA:   3'- -UACGGCGGGAGCGCUGGGCUCCUGGC- -5'
16215	3'	-63.8	NC_004065.1	+	205513	0.67	0.587565
	Target:  5'- -cGCCGCCauCUUGgGGCCgGcgcucAGGGCCGg -3' miRNA:   3'- uaCGGCGG--GAGCgCUGGgC-----UCCUGGC- -5'
16215	3'	-63.8	NC_004065.1	+	205896	0.66	0.663064
	Target:  5'- -cGUCGCCCUUGaCGGaugggccgCCGAGG-CCGa -3' miRNA:   3'- uaCGGCGGGAGC-GCUg-------GGCUCCuGGC- -5'
16215	3'	-63.8	NC_004065.1	+	212826	0.66	0.653633
	Target:  5'- -cGCUGCUCaaGgGACCUGGGGACg- -3' miRNA:   3'- uaCGGCGGGagCgCUGGGCUCCUGgc -5'
16215	3'	-63.8	NC_004065.1	+	223425	0.67	0.60639
	Target:  5'- --aUCGCCUUCccacgugugugGCGACCCGAGGcCCc -3' miRNA:   3'- uacGGCGGGAG-----------CGCUGGGCUCCuGGc -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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