miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
16287	5'	-53.6	NC_004084.1	+	33449	0.66	0.817361
	Target:  5'- aAGGCgAUgauGGGCUGGgcGAagcUGUCCa -3' miRNA:   3'- gUCCGgUGu--CCUGACCuuCU---AUAGGc -5'
16287	5'	-53.6	NC_004084.1	+	13766	0.66	0.798174
	Target:  5'- gAGGUCGCGcugggcGGGCUcGGAGAUcgcGUCCGg -3' miRNA:   3'- gUCCGGUGU------CCUGAcCUUCUA---UAGGC- -5'
16287	5'	-53.6	NC_004084.1	+	53009	0.66	0.788308
	Target:  5'- -cGGCCACGagaccuacuGGAUcgagcGGAAGAaGUCCGg -3' miRNA:   3'- guCCGGUGU---------CCUGa----CCUUCUaUAGGC- -5'
16287	5'	-53.6	NC_004084.1	+	32009	0.66	0.778276
	Target:  5'- aGGGCCACGcGAC-GGAAGGgcucggGUUCGa -3' miRNA:   3'- gUCCGGUGUcCUGaCCUUCUa-----UAGGC- -5'
16287	5'	-53.6	NC_004084.1	+	5351	0.68	0.693431
	Target:  5'- gCGGGCgGCgAGGACUGGGAcGAUcUCg- -3' miRNA:   3'- -GUCCGgUG-UCCUGACCUU-CUAuAGgc -5'
16287	5'	-53.6	NC_004084.1	+	4639	0.68	0.671378
	Target:  5'- gAGGUCACcGG--UGGAAGcgGUCCGg -3' miRNA:   3'- gUCCGGUGuCCugACCUUCuaUAGGC- -5'
16287	5'	-53.6	NC_004084.1	+	52004	0.75	0.304438
	Target:  5'- --aGCCGCGGGACUGGGAGAaggCCc -3' miRNA:   3'- gucCGGUGUCCUGACCUUCUauaGGc -5'
16287	5'	-53.6	NC_004084.1	+	39668	1.09	0.001513
	Target:  5'- uCAGGCCACAGGACUGGAAGAUAUCCGa -3' miRNA:   3'- -GUCCGGUGUCCUGACCUUCUAUAGGC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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