Results 61 - 66 of 66 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. |
strand
|
Start Position | R_P_ratio# | P value |
| Predicted miRNA align pattern | |||||||
| 16306 | 5' | -49.6 | NC_004084.1 | + | 23867 | 0.67 | 0.940961 |
|
Target: 5'- cCUCGCgauGGAcGCGGUGAUCGcuucAGACGAu -3' miRNA: 3'- -GAGUGg--UCU-UGCCGCUAGCa---UUUGCU- -5' |
|||||||
| 16306 | 5' | -49.6 | NC_004084.1 | + | 38901 | 0.67 | 0.935681 |
|
Target: 5'- aUCACguGAAUGGCGAUgacucGACGAc -3' miRNA: 3'- gAGUGguCUUGCCGCUAgcau-UUGCU- -5' |
|||||||
| 16306 | 5' | -49.6 | NC_004084.1 | + | 399 | 0.67 | 0.929537 |
|
Target: 5'- cCUCACCgAGAGCGaGCaggagauGAUCGaGAGCGu -3' miRNA: 3'- -GAGUGG-UCUUGC-CG-------CUAGCaUUUGCu -5' |
|||||||
| 16306 | 5' | -49.6 | NC_004084.1 | + | 17580 | 0.68 | 0.924247 |
|
Target: 5'- -gCACCAGAGCaGGCGGUUGaAAAaGGg -3' miRNA: 3'- gaGUGGUCUUG-CCGCUAGCaUUUgCU- -5' |
|||||||
| 16306 | 5' | -49.6 | NC_004084.1 | + | 3160 | 0.69 | 0.893544 |
|
Target: 5'- -aCGCCGccGAccguagacgucgucgACGGCGAggaCGUGAACGAg -3' miRNA: 3'- gaGUGGU--CU---------------UGCCGCUa--GCAUUUGCU- -5' |
|||||||
| 16306 | 5' | -49.6 | NC_004084.1 | + | 51306 | 0.76 | 0.529727 |
|
Target: 5'- aUCACCAaGACGGCGAcCG-AGGCGAu -3' miRNA: 3'- gAGUGGUcUUGCCGCUaGCaUUUGCU- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home