Results 41 - 45 of 45 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. |
strand
|
Start Position | R_P_ratio# | P value |
| Predicted miRNA align pattern | |||||||
| 16371 | 5' | -54.6 | NC_004084.1 | + | 22381 | 0.68 | 0.697784 |
|
Target: 5'- aUCaUCCAg-GAGGUCgaacgcuACCGGACGAUCa -3' miRNA: 3'- -AGaAGGUggCUCCAG-------UGGUCUGCUGG- -5' |
|||||||
| 16371 | 5' | -54.6 | NC_004084.1 | + | 28398 | 0.68 | 0.687054 |
|
Target: 5'- aUCUUCgcgucgaugcgaaCGCUGAcgucGUCACCAG-CGACCa -3' miRNA: 3'- -AGAAG-------------GUGGCUc---CAGUGGUCuGCUGG- -5' |
|||||||
| 16371 | 5' | -54.6 | NC_004084.1 | + | 11895 | 0.68 | 0.655682 |
|
Target: 5'- aCUUCgauGCCGAGaucGUCAUCAacucGGCGACCg -3' miRNA: 3'- aGAAGg--UGGCUC---CAGUGGU----CUGCUGG- -5' |
|||||||
| 16371 | 5' | -54.6 | NC_004084.1 | + | 28673 | 0.69 | 0.612166 |
|
Target: 5'- aUCgUCuCGCCGGuggucucuccGGUCGcCCGGACGAUCu -3' miRNA: 3'- -AGaAG-GUGGCU----------CCAGU-GGUCUGCUGG- -5' |
|||||||
| 16371 | 5' | -54.6 | NC_004084.1 | + | 2133 | 1.13 | 0.00078 |
|
Target: 5'- cUCUUCCACCGAGGUCACCAGACGACCg -3' miRNA: 3'- -AGAAGGUGGCUCCAGUGGUCUGCUGG- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home