miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
16397	3'	-54.3	NC_004084.1	+	16992	0.66	0.79475
	Target:  5'- --cGGAUGcCGCugGCGAcGUUGCu- -3' miRNA:   3'- cuaCCUACaGCGugUGCUcCAGCGuc -5'
16397	3'	-54.3	NC_004084.1	+	34678	0.66	0.784896
	Target:  5'- cGGUGaGAggcgucacugUGUCGCGCugGGGuGUCGUc- -3' miRNA:   3'- -CUAC-CU----------ACAGCGUGugCUC-CAGCGuc -5'
16397	3'	-54.3	NC_004084.1	+	36513	0.66	0.764721
	Target:  5'- --aGGAUGUCGUACA---GGUCuGCGGc -3' miRNA:   3'- cuaCCUACAGCGUGUgcuCCAG-CGUC- -5'
16397	3'	-54.3	NC_004084.1	+	48658	0.69	0.624296
	Target:  5'- uGAUGGAg--CGCGacauCACGaAGGUCGCGa -3' miRNA:   3'- -CUACCUacaGCGU----GUGC-UCCAGCGUc -5'
16397	3'	-54.3	NC_004084.1	+	882	0.69	0.613246
	Target:  5'- --aGGAguUCGCGCuucgucuCGAGGUCGCGc -3' miRNA:   3'- cuaCCUacAGCGUGu------GCUCCAGCGUc -5'
16397	3'	-54.3	NC_004084.1	+	56224	0.69	0.613246
	Target:  5'- --aGGAgguaGUCGUACuCGAGGgcaUCGCGGg -3' miRNA:   3'- cuaCCUa---CAGCGUGuGCUCC---AGCGUC- -5'
16397	3'	-54.3	NC_004084.1	+	49676	0.76	0.254855
	Target:  5'- uGGUGGAgcgUGUCGCcgACACaGuGGUCGCAGu -3' miRNA:   3'- -CUACCU---ACAGCG--UGUG-CuCCAGCGUC- -5'
16397	3'	-54.3	NC_004084.1	+	12158	1.1	0.001165
	Target:  5'- cGAUGGAUGUCGCACACGAGGUCGCAGg -3' miRNA:   3'- -CUACCUACAGCGUGUGCUCCAGCGUC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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