miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
16661	5'	-54.3	NC_004156.1	+	76893	0.66	0.979504
	Target:  5'- uGGGCUCGGuGGUCGGuGUCauguugUCUaUCGa -3' miRNA:   3'- gUCUGAGCC-UCAGCCuCGGa-----AGA-AGC- -5'
16661	5'	-54.3	NC_004156.1	+	9045	0.66	0.977245
	Target:  5'- -uGAUUCaGAGUCGGAGCCa------ -3' miRNA:   3'- guCUGAGcCUCAGCCUCGGaagaagc -5'
16661	5'	-54.3	NC_004156.1	+	22579	0.67	0.959732
	Target:  5'- gAGACUCGGuGcUCGGAGCUcggugCU-CGg -3' miRNA:   3'- gUCUGAGCCuC-AGCCUCGGaa---GAaGC- -5'
16661	5'	-54.3	NC_004156.1	+	213734	0.68	0.941656
	Target:  5'- aCAGACUCGGuGUCGGccauaaacgaacaGGCCguguguaccgaUUCGg -3' miRNA:   3'- -GUCUGAGCCuCAGCC-------------UCGGaag--------AAGC- -5'
16661	5'	-54.3	NC_004156.1	+	91776	0.7	0.894995
	Target:  5'- uCGGACUCGGAGUCGGuGGCgUcCa--- -3' miRNA:   3'- -GUCUGAGCCUCAGCC-UCGgAaGaagc -5'
16661	5'	-54.3	NC_004156.1	+	222183	0.71	0.867468
	Target:  5'- uCGGAUUCGGGuUCaGAGCCaUCUUCa -3' miRNA:   3'- -GUCUGAGCCUcAGcCUCGGaAGAAGc -5'
16661	5'	-54.3	NC_004156.1	+	127610	0.77	0.540866
	Target:  5'- uCAGAUUgGGAGUCGGAGCCauguacaCUUUGg -3' miRNA:   3'- -GUCUGAgCCUCAGCCUCGGaa-----GAAGC- -5'
16661	5'	-54.3	NC_004156.1	+	9103	1.09	0.006578
	Target:  5'- uCAGACUCGGAGUCGGAGCCUUCUUCGg -3' miRNA:   3'- -GUCUGAGCCUCAGCCUCGGAAGAAGC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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