miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
17037	5'	-54.5	NC_004333.2	+	22176	0.66	0.649678
	Target:  5'- -cGCCggcgGCGGccGGCGGCGGU--UCGg -3' miRNA:   3'- aaCGGaa--CGUCa-UCGCCGUCAcuAGC- -5'
17037	5'	-54.5	NC_004333.2	+	7984	0.66	0.626823
	Target:  5'- cUGCCaaGCGGgaauCGGCGGaUGAUCGc -3' miRNA:   3'- aACGGaaCGUCauc-GCCGUC-ACUAGC- -5'
17037	5'	-54.5	NC_004333.2	+	31413	0.67	0.615397
	Target:  5'- -cGCCUUGCcGUGuCGGCGcaGAUCGu -3' miRNA:   3'- aaCGGAACGuCAUcGCCGUcaCUAGC- -5'
17037	5'	-54.5	NC_004333.2	+	8995	0.67	0.610831
	Target:  5'- cUGCCggUGCAGcgcgcgcagcacgGGCGGCAGgauGUCGu -3' miRNA:   3'- aACGGa-ACGUCa------------UCGCCGUCac-UAGC- -5'
17037	5'	-54.5	NC_004333.2	+	45529	0.7	0.440782
	Target:  5'- -cGCCccGCAuucgAGCGGUGGUGGUCGc -3' miRNA:   3'- aaCGGaaCGUca--UCGCCGUCACUAGC- -5'
17037	5'	-54.5	NC_004333.2	+	10936	0.74	0.254275
	Target:  5'- aUGCCggUGCGGU-GCGGUaaagacgaAGUGAUCGu -3' miRNA:   3'- aACGGa-ACGUCAuCGCCG--------UCACUAGC- -5'
17037	5'	-54.5	NC_004333.2	+	35241	0.75	0.216117
	Target:  5'- -cGCC-UGCAGU-GCGGCAuUGGUCGa -3' miRNA:   3'- aaCGGaACGUCAuCGCCGUcACUAGC- -5'
17037	5'	-54.5	NC_004333.2	+	30958	1.06	0.001275
	Target:  5'- uUUGCCUUGCAGUAGCGGCAGUGAUCGc -3' miRNA:   3'- -AACGGAACGUCAUCGCCGUCACUAGC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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