Results 41 - 60 of 247 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 198975 | 0.66 | 0.987926 |
Target: 5'- gGUgaGCCGCgGCGAuuCGGGCGUGCcgcgaUGCCg -3' miRNA: 3'- gCAg-CGGCG-CGUU--GUUUGCGCG-----AUGG- -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 76901 | 0.66 | 0.987926 |
Target: 5'- gGUU-CUGCGCGGCGAucacCGUGgUACCg -3' miRNA: 3'- gCAGcGGCGCGUUGUUu---GCGCgAUGG- -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 53478 | 0.66 | 0.987926 |
Target: 5'- -uUCGUCGU-CAACGAuggcACGCGUUAUCa -3' miRNA: 3'- gcAGCGGCGcGUUGUU----UGCGCGAUGG- -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 199341 | 0.66 | 0.987926 |
Target: 5'- -uUCGuuGagGCGGCGGAgGUGCUGCa -3' miRNA: 3'- gcAGCggCg-CGUUGUUUgCGCGAUGg -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 39045 | 0.66 | 0.988071 |
Target: 5'- gCGUC-CCGCgGCGACAGuugacgcagguccguCGCGCccacGCCg -3' miRNA: 3'- -GCAGcGGCG-CGUUGUUu--------------GCGCGa---UGG- -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 153861 | 0.66 | 0.986408 |
Target: 5'- uCGUgUGCCGCGCcgAGCGgcGACGUGCa--- -3' miRNA: 3'- -GCA-GCGGCGCG--UUGU--UUGCGCGaugg -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 161983 | 0.66 | 0.986408 |
Target: 5'- aGUcCGCCGCuCAuuuuGugGCGCgugACCa -3' miRNA: 3'- gCA-GCGGCGcGUugu-UugCGCGa--UGG- -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 89417 | 0.66 | 0.984748 |
Target: 5'- aGcCGCgGCGCAgucuuggauaACGAugGgGCUAUa -3' miRNA: 3'- gCaGCGgCGCGU----------UGUUugCgCGAUGg -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 88283 | 0.66 | 0.984748 |
Target: 5'- aCGUCGCCGuCGCGAUcguACuCGaacgACCa -3' miRNA: 3'- -GCAGCGGC-GCGUUGuu-UGcGCga--UGG- -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 63108 | 0.66 | 0.984748 |
Target: 5'- cCGUgGCCGcCGCGGCc-GC-CGCUgugGCCg -3' miRNA: 3'- -GCAgCGGC-GCGUUGuuUGcGCGA---UGG- -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 194044 | 0.66 | 0.984748 |
Target: 5'- -uUCG-UGCGCGugGGGCugGCGCUGCUc -3' miRNA: 3'- gcAGCgGCGCGUugUUUG--CGCGAUGG- -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 92261 | 0.66 | 0.984748 |
Target: 5'- cCGUgGCCGcCGcCAugAGGCGCGUcauggaagggaUAUCg -3' miRNA: 3'- -GCAgCGGC-GC-GUugUUUGCGCG-----------AUGG- -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 201833 | 0.66 | 0.984748 |
Target: 5'- aCG-CGuUCGCGCAgu-GGCGUGCUACg -3' miRNA: 3'- -GCaGC-GGCGCGUuguUUGCGCGAUGg -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 157725 | 0.66 | 0.984748 |
Target: 5'- -cUCGCCGUGCcuAGCAuuacuACGCGCcaaGCg -3' miRNA: 3'- gcAGCGGCGCG--UUGUu----UGCGCGa--UGg -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 118470 | 0.66 | 0.984748 |
Target: 5'- cCGcCaCCGCGCGGCAGACGCa----- -3' miRNA: 3'- -GCaGcGGCGCGUUGUUUGCGcgaugg -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 150494 | 0.66 | 0.986408 |
Target: 5'- uGUCGCCGCccuuGCAAUc--UGCGCcguCCa -3' miRNA: 3'- gCAGCGGCG----CGUUGuuuGCGCGau-GG- -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 158092 | 0.66 | 0.986408 |
Target: 5'- aG-CGCCGCGCu----GCGCgGCgGCCu -3' miRNA: 3'- gCaGCGGCGCGuuguuUGCG-CGaUGG- -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 20320 | 0.66 | 0.986408 |
Target: 5'- gGUCGCUGCcaCAGCAGcgGCGUcGCCc -3' miRNA: 3'- gCAGCGGCGc-GUUGUUugCGCGaUGG- -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 184226 | 0.66 | 0.986408 |
Target: 5'- gGUCGCUagcguGuCGCAGCGuuCGCcgccGUUGCCg -3' miRNA: 3'- gCAGCGG-----C-GCGUUGUuuGCG----CGAUGG- -5' |
|||||||
1704 | 3' | -54.1 | NC_001347.2 | + | 10812 | 0.66 | 0.986408 |
Target: 5'- uGUaCGCCaucaGCGCGAUggGCGCcagGUaGCCg -3' miRNA: 3'- gCA-GCGG----CGCGUUGuuUGCG---CGaUGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home