miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
18048	3'	-53.9	NC_004680.1	+	23864	0.66	0.830984
	Target:  5'- cGCCGUCAcAUCgGUgACAUCG-GCCa -3' miRNA:   3'- -UGGCAGUuUGGgCAgUGUGGCuUGGc -5'
18048	3'	-53.9	NC_004680.1	+	45268	0.66	0.830984
	Target:  5'- -aCGUUGGugUCGUCGCGgCGAgaGCCGc -3' miRNA:   3'- ugGCAGUUugGGCAGUGUgGCU--UGGC- -5'
18048	3'	-53.9	NC_004680.1	+	24144	0.66	0.830984
	Target:  5'- cACCGUCuuGAAUcuucgCCGaCGuCACCGAACCa -3' miRNA:   3'- -UGGCAG--UUUG-----GGCaGU-GUGGCUUGGc -5'
18048	3'	-53.9	NC_004680.1	+	17415	0.66	0.839805
	Target:  5'- -aCGUCAccGACCCcgccugacguUCACACCGAaaauagaucgucGCCGg -3' miRNA:   3'- ugGCAGU--UUGGGc---------AGUGUGGCU------------UGGC- -5'
18048	3'	-53.9	NC_004680.1	+	46025	0.66	0.84841
	Target:  5'- gGCCGc----CCCGUCAcCGCCGAauucaccaccACCGa -3' miRNA:   3'- -UGGCaguuuGGGCAGU-GUGGCU----------UGGC- -5'
18048	3'	-53.9	NC_004680.1	+	20752	0.66	0.84841
	Target:  5'- cGCCGaUCGGGCCUGUUcCGCC--GCCa -3' miRNA:   3'- -UGGC-AGUUUGGGCAGuGUGGcuUGGc -5'
18048	3'	-53.9	NC_004680.1	+	1716	0.66	0.819211
	Target:  5'- aGCCGUCGcaucucuccaccgcGACCCGUCAaACCcAGCa- -3' miRNA:   3'- -UGGCAGU--------------UUGGGCAGUgUGGcUUGgc -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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