miRNA display CGI

Results 61 - 67 of 67 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
18304	5'	-57.8	NC_004681.1	+	63805	0.71	0.406057
	Target:  5'- uGCAauuGUgCGACCAUGACGAgucCGcGGCGCAc -3' miRNA:   3'- gCGU---CA-GCUGGUGCUGCU---GC-CCGUGU- -5'
18304	5'	-57.8	NC_004681.1	+	68716	0.69	0.509706
	Target:  5'- aCGCAGU-GACCAUGAUcGCuGGCACc -3' miRNA:   3'- -GCGUCAgCUGGUGCUGcUGcCCGUGu -5'
18304	5'	-57.8	NC_004681.1	+	69008	0.68	0.55013
	Target:  5'- gGCGG-CGGCCGUGACGAUGGucaGCGCc -3' miRNA:   3'- gCGUCaGCUGGUGCUGCUGCC---CGUGu -5'
18304	5'	-57.8	NC_004681.1	+	69611	0.68	0.560398
	Target:  5'- aGCAGU-GAgCAC-ACGGCGuGGCGCAc -3' miRNA:   3'- gCGUCAgCUgGUGcUGCUGC-CCGUGU- -5'
18304	5'	-57.8	NC_004681.1	+	72243	0.71	0.423928
	Target:  5'- gGCGGUUGAuggacuCCACGAUGGCGcGGUAUu -3' miRNA:   3'- gCGUCAGCU------GGUGCUGCUGC-CCGUGu -5'
18304	5'	-57.8	NC_004681.1	+	74201	0.66	0.706177
	Target:  5'- cCGCAGUaGGCCACGACGuugguucCGuGGaUACGg -3' miRNA:   3'- -GCGUCAgCUGGUGCUGCu------GC-CC-GUGU- -5'
18304	5'	-57.8	NC_004681.1	+	74393	0.66	0.695892
	Target:  5'- aCGguGagGACUACGugGACagccuccguGaGGCACAc -3' miRNA:   3'- -GCguCagCUGGUGCugCUG---------C-CCGUGU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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