Results 61 - 66 of 66 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio #
|
P value |
| Predicted miRNA align pattern | |||||||
| 18449 | 3' | -54.8 | NC_004681.1 | + | 59019 | 0.66 | 0.83922 |
|
Target: 5'- gGCGCCCaCCG-CgaaUUUGAccacGACACCCa -3' miRNA: 3'- -CGUGGG-GGCuGaa-GAGCUa---CUGUGGG- -5' |
|||||||
| 18449 | 3' | -54.8 | NC_004681.1 | + | 19058 | 0.66 | 0.830604 |
|
Target: 5'- cCGCCgagCUCGACUUCacugUCGA-GGCAUCCg -3' miRNA: 3'- cGUGG---GGGCUGAAG----AGCUaCUGUGGG- -5' |
|||||||
| 18449 | 3' | -54.8 | NC_004681.1 | + | 69047 | 0.66 | 0.821793 |
|
Target: 5'- cGCACCUgCGACac--CGAUGGCugCg -3' miRNA: 3'- -CGUGGGgGCUGaagaGCUACUGugGg -5' |
|||||||
| 18449 | 3' | -54.8 | NC_004681.1 | + | 53502 | 0.66 | 0.821793 |
|
Target: 5'- gGCACCCauGACcg--CGGUGACAUCg -3' miRNA: 3'- -CGUGGGggCUGaagaGCUACUGUGGg -5' |
|||||||
| 18449 | 3' | -54.8 | NC_004681.1 | + | 17557 | 0.66 | 0.821793 |
|
Target: 5'- gGCACCCCCuucaACUggggCaGUGACGCCg -3' miRNA: 3'- -CGUGGGGGc---UGAaga-GcUACUGUGGg -5' |
|||||||
| 18449 | 3' | -54.8 | NC_004681.1 | + | 6473 | 0.66 | 0.863811 |
|
Target: 5'- --cCCCUCGACagcgccaUCGGgcgUGGCGCCCa -3' miRNA: 3'- cguGGGGGCUGaag----AGCU---ACUGUGGG- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home