miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
18461	3'	-58.7	NC_004681.1	+	16252	0.69	0.442974
	Target:  5'- cGCGAUgaGCGACGGGAugGCCgCCaGCGc -3' miRNA:   3'- aUGCUGg-CGCUGCCCU--UGGaGGaCGU- -5'
18461	3'	-58.7	NC_004681.1	+	10758	0.69	0.452381
	Target:  5'- gACGGCCGCGGgcacCGGGGGCg-CCagGCAg -3' miRNA:   3'- aUGCUGGCGCU----GCCCUUGgaGGa-CGU- -5'
18461	3'	-58.7	NC_004681.1	+	9229	0.69	0.442974
	Target:  5'- gAUGAacccgCGCGACuGGGAgCUCCUGCGc -3' miRNA:   3'- aUGCUg----GCGCUGcCCUUgGAGGACGU- -5'
18461	3'	-58.7	NC_004681.1	+	8910	0.66	0.597579
	Target:  5'- -cUGGCUgGCGGCGGGuaccccggcgucaacGGCCUgCUGCAg -3' miRNA:   3'- auGCUGG-CGCUGCCC---------------UUGGAgGACGU- -5'
18461	3'	-58.7	NC_004681.1	+	8807	0.66	0.593377
	Target:  5'- aGCGACCGCGGCGGcguUgUUgUGCGc -3' miRNA:   3'- aUGCUGGCGCUGCCcuuGgAGgACGU- -5'
18461	3'	-58.7	NC_004681.1	+	7463	0.66	0.614425
	Target:  5'- -uCGGCCGCGggcuugGCGGGAGgCUUCgccGCGg -3' miRNA:   3'- auGCUGGCGC------UGCCCUUgGAGGa--CGU- -5'
18461	3'	-58.7	NC_004681.1	+	3066	0.67	0.531187
	Target:  5'- gAUGGCCGCGAauaucuCGGGGuCCUCgCUGg- -3' miRNA:   3'- aUGCUGGCGCU------GCCCUuGGAG-GACgu -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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