Results 41 - 46 of 46 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio #
|
P value |
| Predicted miRNA align pattern | |||||||
| 1923 | 5' | -66 | NC_001347.2 | + | 136106 | 0.74 | 0.186287 |
|
Target: 5'- cGCCGGGCcucGGCCGgGGagGGUGGGg -3' miRNA: 3'- aCGGCCCGuacCCGGCgCCg-CCACCU- -5' |
|||||||
| 1923 | 5' | -66 | NC_001347.2 | + | 13524 | 0.76 | 0.151197 |
|
Target: 5'- cGCCGGGCGgcccGGGCCGCcGUGcUGGAg -3' miRNA: 3'- aCGGCCCGUa---CCCGGCGcCGCcACCU- -5' |
|||||||
| 1923 | 5' | -66 | NC_001347.2 | + | 166052 | 0.77 | 0.125163 |
|
Target: 5'- gUGUCGGGCGUcaugcGGaGUCGCGGCGGUuGGGg -3' miRNA: 3'- -ACGGCCCGUA-----CC-CGGCGCCGCCA-CCU- -5' |
|||||||
| 1923 | 5' | -66 | NC_001347.2 | + | 47116 | 0.77 | 0.116518 |
|
Target: 5'- aUGCCGauGGUAUGGGCgGCGGCGGcaaUGGc -3' miRNA: 3'- -ACGGC--CCGUACCCGgCGCCGCC---ACCu -5' |
|||||||
| 1923 | 5' | -66 | NC_001347.2 | + | 40394 | 0.78 | 0.108432 |
|
Target: 5'- cGCCGGuGCG-GGGCCGCG-UGGUGGGu -3' miRNA: 3'- aCGGCC-CGUaCCCGGCGCcGCCACCU- -5' |
|||||||
| 1923 | 5' | -66 | NC_001347.2 | + | 77306 | 0.83 | 0.047144 |
|
Target: 5'- cGUacuUGGGCGUGGGCCGCGGC-GUGGAu -3' miRNA: 3'- aCG---GCCCGUACCCGGCGCCGcCACCU- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home