Results 81 - 82 of 82 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
20407 | 5' | -63.5 | NC_004688.1 | + | 75838 | 0.66 | 0.49819 |
Target: 5'- uUCCGCCUCGaguuugucgGCCGCGgccucgucgcCCCGCUgaaugGCg -3' miRNA: 3'- -AGGCGGGGCg--------CGGUGU----------GGGCGAa----CGg -5' |
|||||||
20407 | 5' | -63.5 | NC_004688.1 | + | 59311 | 0.66 | 0.517002 |
Target: 5'- cCUGCCCgaCGCgaugGCCGcCGCCgGCUacgGCCg -3' miRNA: 3'- aGGCGGG--GCG----CGGU-GUGGgCGAa--CGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home