miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
2045	3'	-59.3	NC_001347.2	+	173656	0.74	0.39904
	Target:  5'- uGGGAGGAGgUGgCGGCgguGGCGGCa -3' miRNA:   3'- -UCUUCCUCgAUgGCCGaguCCGCCGg -5'
2045	3'	-59.3	NC_001347.2	+	36667	0.75	0.390954
	Target:  5'- cGucGGAGCUcagACCgGGCUCcggcGGGUGGCCu -3' miRNA:   3'- uCuuCCUCGA---UGG-CCGAG----UCCGCCGG- -5'
2045	3'	-59.3	NC_001347.2	+	113170	0.76	0.330232
	Target:  5'- aAGAGGGAacgcgcgccccaGCcGCCGGCgu-GGCGGCCu -3' miRNA:   3'- -UCUUCCU------------CGaUGGCCGaguCCGCCGG- -5'
2045	3'	-59.3	NC_001347.2	+	172534	0.77	0.295954
	Target:  5'- --cGGGGGCccGCUGGCUCGGcGCGGCUg -3' miRNA:   3'- ucuUCCUCGa-UGGCCGAGUC-CGCCGG- -5'
2045	3'	-59.3	NC_001347.2	+	87760	0.77	0.28944
	Target:  5'- cGAAGGAGCc-CUGGCcCAGGCGGUa -3' miRNA:   3'- uCUUCCUCGauGGCCGaGUCCGCCGg -5'
2045	3'	-59.3	NC_001347.2	+	126881	0.78	0.246974
	Target:  5'- ---uGGGGCUgGCCGGCUacGGCGGCCg -3' miRNA:   3'- ucuuCCUCGA-UGGCCGAguCCGCCGG- -5'
2045	3'	-59.3	NC_001347.2	+	156763	0.85	0.089549
	Target:  5'- gAGGAGGAGUUGCUGGCUCuggcgggagaagggaAGGCGGCa -3' miRNA:   3'- -UCUUCCUCGAUGGCCGAG---------------UCCGCCGg -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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