miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
2045	3'	-59.3	NC_001347.2	+	172534	0.77	0.295954
	Target:  5'- --cGGGGGCccGCUGGCUCGGcGCGGCUg -3' miRNA:   3'- ucuUCCUCGa-UGGCCGAGUC-CGCCGG- -5'
2045	3'	-59.3	NC_001347.2	+	173656	0.74	0.39904
	Target:  5'- uGGGAGGAGgUGgCGGCgguGGCGGCa -3' miRNA:   3'- -UCUUCCUCgAUgGCCGaguCCGCCGg -5'
2045	3'	-59.3	NC_001347.2	+	188169	0.68	0.762314
	Target:  5'- cGAAGcccacGCUGCCcGUUC-GGCGGCCg -3' miRNA:   3'- uCUUCcu---CGAUGGcCGAGuCCGCCGG- -5'
2045	3'	-59.3	NC_001347.2	+	197543	0.72	0.522393
	Target:  5'- gGGAccGcAGCgugGCCGGCgu-GGCGGCCg -3' miRNA:   3'- -UCUucC-UCGa--UGGCCGaguCCGCCGG- -5'
2045	3'	-59.3	NC_001347.2	+	200090	0.67	0.780259
	Target:  5'- gGGcGGGAcGUUauauagugaggGCCGGCUCcGGCGGgCa -3' miRNA:   3'- -UCuUCCU-CGA-----------UGGCCGAGuCCGCCgG- -5'
2045	3'	-59.3	NC_001347.2	+	201777	0.71	0.560412
	Target:  5'- -aGAGGAGCUGCCGcacaccgccucGCUUAGaGCgcuGGCCg -3' miRNA:   3'- ucUUCCUCGAUGGC-----------CGAGUC-CG---CCGG- -5'
2045	3'	-59.3	NC_001347.2	+	207140	0.67	0.821229
	Target:  5'- cGGAGGGGUguuuggcgagcCCGGaucCGGGCGGUCu -3' miRNA:   3'- uCUUCCUCGau---------GGCCga-GUCCGCCGG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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