miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
21196	5'	-57.8	NC_004778.3	+	9448	0.66	0.775273
	Target:  5'- ----aCACGGcCGUcgUCUCGGCGgCGCAg -3' miRNA:   3'- uuuuaGUGCC-GCG--AGGGCUGCgGCGU- -5'
21196	5'	-57.8	NC_004778.3	+	21013	0.66	0.775273
	Target:  5'- ----cCGCGGCGCaccagcgcgUCCaccuGCGCCGCGg -3' miRNA:   3'- uuuuaGUGCCGCG---------AGGgc--UGCGGCGU- -5'
21196	5'	-57.8	NC_004778.3	+	85692	0.66	0.781822
	Target:  5'- -cGAUCGCGcGCgGUggacacaugaugugUCCCGGCGCgGCGc -3' miRNA:   3'- uuUUAGUGC-CG-CG--------------AGGGCUGCGgCGU- -5'
21196	5'	-57.8	NC_004778.3	+	25784	0.66	0.784608
	Target:  5'- gGAGAaCACGGUGCUacaCCgCGACGgCGUg -3' miRNA:   3'- -UUUUaGUGCCGCGA---GG-GCUGCgGCGu -5'
21196	5'	-57.8	NC_004778.3	+	43846	0.66	0.793805
	Target:  5'- ----gCGCGGC-CgUCCGACGCgGCAa -3' miRNA:   3'- uuuuaGUGCCGcGaGGGCUGCGgCGU- -5'
21196	5'	-57.8	NC_004778.3	+	7726	0.66	0.801056
	Target:  5'- ----cUACGGCGCgccgacaacgugCCCGACGCgggccUGCAc -3' miRNA:   3'- uuuuaGUGCCGCGa-----------GGGCUGCG-----GCGU- -5'
21196	5'	-57.8	NC_004778.3	+	7828	0.66	0.802853
	Target:  5'- -----gACGGCGUggaCCGcGCGCUGCAg -3' miRNA:   3'- uuuuagUGCCGCGag-GGC-UGCGGCGU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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