miRNA display CGI

Results 21 - 28 of 28 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
21200	3'	-50.2	NC_004778.3	+	44153	0.66	0.990257
	Target:  5'- cGGGCGUUUgCGgc-GGCGAcgGCa-- -3' miRNA:   3'- -CCCGCAAGaGCauuUCGCUuaCGguu -5'
21200	3'	-50.2	NC_004778.3	+	44123	0.66	0.990257
	Target:  5'- cGGGCGUUUgCGgc-GGCGAcgGCa-- -3' miRNA:   3'- -CCCGCAAGaGCauuUCGCUuaCGguu -5'
21200	3'	-50.2	NC_004778.3	+	44093	0.66	0.991519
	Target:  5'- cGGGCGUUUgCGgc-GGCG-AUGUCAu -3' miRNA:   3'- -CCCGCAAGaGCauuUCGCuUACGGUu -5'
21200	3'	-50.2	NC_004778.3	+	44063	0.66	0.991519
	Target:  5'- cGGGCGUUUgCGgc-GGCG-AUGUCAu -3' miRNA:   3'- -CCCGCAAGaGCauuUCGCuUACGGUu -5'
21200	3'	-50.2	NC_004778.3	+	36323	0.69	0.953259
	Target:  5'- aGGGCGUggUCGUAccGGGCGucAUGUCGc -3' miRNA:   3'- -CCCGCAagAGCAU--UUCGCu-UACGGUu -5'
21200	3'	-50.2	NC_004778.3	+	30156	0.73	0.798054
	Target:  5'- -aGCGUUCUCGaAAAGCGAGcGCUAu -3' miRNA:   3'- ccCGCAAGAGCaUUUCGCUUaCGGUu -5'
21200	3'	-50.2	NC_004778.3	+	19991	0.67	0.981603
	Target:  5'- cGGGCacgUCUguaccCGaAAAGCGAGUGCUAu -3' miRNA:   3'- -CCCGca-AGA-----GCaUUUCGCUUACGGUu -5'
21200	3'	-50.2	NC_004778.3	+	19711	0.9	0.11861
	Target:  5'- cGGGUGUUCUCGaAAAGCGAGUGCUAu -3' miRNA:   3'- -CCCGCAAGAGCaUUUCGCUUACGGUu -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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