Results 81 - 86 of 86 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. |
strand
|
Start Position | R_P_ratio# | P value |
| Predicted miRNA align pattern | |||||||
| 21234 | 3' | -49.7 | NC_004778.3 | + | 64864 | 0.69 | 0.961756 |
|
Target: 5'- aCCGACGUACGUUUGAauaugccAGcgGGCAa- -3' miRNA: 3'- cGGCUGCGUGCAGAUU-------UCuaUCGUga -5' |
|||||||
| 21234 | 3' | -49.7 | NC_004778.3 | + | 61373 | 0.69 | 0.962121 |
|
Target: 5'- cGCCGGCGCGuCGUCgcug---AGCGCc -3' miRNA: 3'- -CGGCUGCGU-GCAGauuucuaUCGUGa -5' |
|||||||
| 21234 | 3' | -49.7 | NC_004778.3 | + | 29334 | 0.69 | 0.96564 |
|
Target: 5'- gGCgCGGCGCGCG-CUGGGGu--GCGCc -3' miRNA: 3'- -CG-GCUGCGUGCaGAUUUCuauCGUGa -5' |
|||||||
| 21234 | 3' | -49.7 | NC_004778.3 | + | 44867 | 0.69 | 0.96564 |
|
Target: 5'- gGCCuGCGaCAUGUCUuuGGAaacguUGGCGCUg -3' miRNA: 3'- -CGGcUGC-GUGCAGAuuUCU-----AUCGUGA- -5' |
|||||||
| 21234 | 3' | -49.7 | NC_004778.3 | + | 68139 | 0.69 | 0.968922 |
|
Target: 5'- gGCCGuacucuCGCACGUCggc-GAcGGCGCa -3' miRNA: 3'- -CGGCu-----GCGUGCAGauuuCUaUCGUGa -5' |
|||||||
| 21234 | 3' | -49.7 | NC_004778.3 | + | 115145 | 0.66 | 0.995444 |
|
Target: 5'- cGCCaGCGCGgGUCaUAAuguGGUGGUGCUc -3' miRNA: 3'- -CGGcUGCGUgCAG-AUUu--CUAUCGUGA- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home