miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
21311	3'	-55.8	NC_004778.3	+	114222	0.72	0.550718
	Target:  5'- aAGaCAugCUCACUUUCGGcCGCGCGGCc -3' miRNA:   3'- cUC-GUugGGGUGAAGGCU-GCGCGUUG- -5'
21311	3'	-55.8	NC_004778.3	+	114518	0.68	0.765801
	Target:  5'- aGGGcCGGCCUCGCccgCGGCGCGCAGg -3' miRNA:   3'- -CUC-GUUGGGGUGaagGCUGCGCGUUg -5'
21311	3'	-55.8	NC_004778.3	+	115479	0.67	0.828023
	Target:  5'- --aCGGCCaCCACUcacgccaaaugcCCGGCGUGCAGCa -3' miRNA:   3'- cucGUUGG-GGUGAa-----------GGCUGCGCGUUG- -5'
21311	3'	-55.8	NC_004778.3	+	117181	0.68	0.791355
	Target:  5'- gGAGCcACCCCGCaaaugggcuUUCCGcugaauacaacgauGCGCGCuAACc -3' miRNA:   3'- -CUCGuUGGGGUG---------AAGGC--------------UGCGCG-UUG- -5'
21311	3'	-55.8	NC_004778.3	+	120971	0.66	0.86236
	Target:  5'- cGGGCcGCgCCCGCUgccCCGGCGcCGCc-- -3' miRNA:   3'- -CUCGuUG-GGGUGAa--GGCUGC-GCGuug -5'
21311	3'	-55.8	NC_004778.3	+	121403	0.74	0.461968
	Target:  5'- aGAGCGACCCCGCcgcagaccCCGACuCGCcGCa -3' miRNA:   3'- -CUCGUUGGGGUGaa------GGCUGcGCGuUG- -5'
21311	3'	-55.8	NC_004778.3	+	121579	0.66	0.86236
	Target:  5'- cGGCGGCgaCACggCCGACGCGUg-- -3' miRNA:   3'- cUCGUUGggGUGaaGGCUGCGCGuug -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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