Results 141 - 160 of 414 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
21382 | 3' | -58 | NC_004812.1 | + | 120251 | 0.69 | 0.624822 |
Target: 5'- --cCGUGGC--CCugGUggGCGGGCGCGa -3' miRNA: 3'- aaaGCGCCGuuGGugCA--CGUCCGCGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 153176 | 0.69 | 0.614568 |
Target: 5'- --cCGCGGCGgcuggcGCCGCGUGCcgccgGGGCcCAg -3' miRNA: 3'- aaaGCGCCGU------UGGUGCACG-----UCCGcGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 97318 | 0.69 | 0.614568 |
Target: 5'- -cUCGCGGCGGgCGgGUGCc-GCGCGc -3' miRNA: 3'- aaAGCGCCGUUgGUgCACGucCGCGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 147551 | 0.69 | 0.604327 |
Target: 5'- ---gGCGGCGgguuCCGgGUGCcGGCGCGg -3' miRNA: 3'- aaagCGCCGUu---GGUgCACGuCCGCGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 7525 | 0.69 | 0.628926 |
Target: 5'- --cCGCGGCGcGCCGCcccucccgcccacucGgggGCGGGCGCGg -3' miRNA: 3'- aaaGCGCCGU-UGGUG---------------Ca--CGUCCGCGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 130396 | 0.69 | 0.604327 |
Target: 5'- -gUCGCGccCGGCCACG-GCGGcGCGCGc -3' miRNA: 3'- aaAGCGCc-GUUGGUGCaCGUC-CGCGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 151035 | 0.69 | 0.624822 |
Target: 5'- --cCGUGGC--CCugGUggGCGGGCGCGa -3' miRNA: 3'- aaaGCGCCGuuGGugCA--CGUCCGCGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 86981 | 0.69 | 0.624822 |
Target: 5'- --cCGCGGguGCCggaGCG-GCGGGgGCAc -3' miRNA: 3'- aaaGCGCCguUGG---UGCaCGUCCgCGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 80256 | 0.69 | 0.624822 |
Target: 5'- ---gGCGGCGGCCGCGgaccugGCGguggcGGUGCGg -3' miRNA: 3'- aaagCGCCGUUGGUGCa-----CGU-----CCGCGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 27668 | 0.69 | 0.614568 |
Target: 5'- --cCGCGGCGgcuggcGCCGCGUGCcgccgGGGCcCAg -3' miRNA: 3'- aaaGCGCCGU------UGGUGCACG-----UCCGcGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 72016 | 0.69 | 0.614568 |
Target: 5'- -gUCGCGGCgAGCCcCG-GUGGGuCGCAg -3' miRNA: 3'- aaAGCGCCG-UUGGuGCaCGUCC-GCGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 138302 | 0.69 | 0.604327 |
Target: 5'- -gUCGCGGCGGgCuCGgagGguGGCGCc -3' miRNA: 3'- aaAGCGCCGUUgGuGCa--CguCCGCGu -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 124225 | 0.69 | 0.604327 |
Target: 5'- --cCGCGGCGcACCugGcgGCGGGCcugGCGg -3' miRNA: 3'- aaaGCGCCGU-UGGugCa-CGUCCG---CGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 4888 | 0.69 | 0.604327 |
Target: 5'- -gUCGCGccCGGCCACG-GCGGcGCGCGc -3' miRNA: 3'- aaAGCGCc-GUUGGUGCaCGUC-CGCGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 18704 | 0.69 | 0.604327 |
Target: 5'- ---aGCGGCAGCCGCaGUaGCuccgcGGCGCu -3' miRNA: 3'- aaagCGCCGUUGGUG-CA-CGu----CCGCGu -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 3916 | 0.69 | 0.604327 |
Target: 5'- --gCGCGGCGgcgggGCCGCGcggcggcgGCAcGGCGCGc -3' miRNA: 3'- aaaGCGCCGU-----UGGUGCa-------CGU-CCGCGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 15003 | 0.69 | 0.604327 |
Target: 5'- --gCGCGGCAgGuuGCGgacgggGCAGGCGCc -3' miRNA: 3'- aaaGCGCCGU-UggUGCa-----CGUCCGCGu -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 127737 | 0.69 | 0.635082 |
Target: 5'- --cCGCGGcCAGCgCACGcGC-GGCGCGg -3' miRNA: 3'- aaaGCGCC-GUUG-GUGCaCGuCCGCGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 102010 | 0.69 | 0.624822 |
Target: 5'- -cUCGCGGCGccGCCGCGagGguGGCuCGu -3' miRNA: 3'- aaAGCGCCGU--UGGUGCa-CguCCGcGU- -5' |
|||||||
21382 | 3' | -58 | NC_004812.1 | + | 120134 | 0.69 | 0.624822 |
Target: 5'- --cCGUGGC--CCugGUggGCGGGCGCGa -3' miRNA: 3'- aaaGCGCCGuuGGugCA--CGUCCGCGU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home