Results 41 - 60 of 260 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 24657 | 0.81 | 0.111423 |
Target: 5'- aGGGGGgaagggaagGGGGGAagGGAAGGGGGGAa -3' miRNA: 3'- aCCCCCaaa------CCCCCU--CCUUCCCCUUU- -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 150126 | 0.81 | 0.111423 |
Target: 5'- aGGGGGgaagggaagGGGGGAagGGAAGGGGGGAa -3' miRNA: 3'- aCCCCCaaa------CCCCCU--CCUUCCCCUUU- -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 150165 | 0.81 | 0.111423 |
Target: 5'- aGGGGGgaagggaagGGGGGAagGGAAGGGGGGAa -3' miRNA: 3'- aCCCCCaaa------CCCCCU--CCUUCCCCUUU- -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 150204 | 0.81 | 0.111423 |
Target: 5'- aGGGGGgaagggaagGGGGGAagGGAAGGGGGGAa -3' miRNA: 3'- aCCCCCaaa------CCCCCU--CCUUCCCCUUU- -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 150243 | 0.81 | 0.111423 |
Target: 5'- aGGGGGgaagggaagGGGGGAagGGAAGGGGGGAa -3' miRNA: 3'- aCCCCCaaa------CCCCCU--CCUUCCCCUUU- -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 150282 | 0.81 | 0.111423 |
Target: 5'- aGGGGGgaagggaagGGGGGAagGGAAGGGGGGAa -3' miRNA: 3'- aCCCCCaaa------CCCCCU--CCUUCCCCUUU- -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 150321 | 0.81 | 0.111423 |
Target: 5'- aGGGGGgaagggaagGGGGGAagGGAAGGGGGGAa -3' miRNA: 3'- aCCCCCaaa------CCCCCU--CCUUCCCCUUU- -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 150360 | 0.81 | 0.111423 |
Target: 5'- aGGGGGgaagggaagGGGGGAagGGAAGGGGGGAa -3' miRNA: 3'- aCCCCCaaa------CCCCCU--CCUUCCCCUUU- -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 150087 | 0.81 | 0.111423 |
Target: 5'- aGGGGGgaagggaagGGGGGAagGGAAGGGGGGAa -3' miRNA: 3'- aCCCCCaaa------CCCCCU--CCUUCCCCUUU- -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 24774 | 0.81 | 0.111423 |
Target: 5'- aGGGGGgaagggaagGGGGGAagGGAAGGGGGGAa -3' miRNA: 3'- aCCCCCaaa------CCCCCU--CCUUCCCCUUU- -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 150048 | 0.81 | 0.111423 |
Target: 5'- aGGGGGgaagggaagGGGGGAagGGAAGGGGGGAa -3' miRNA: 3'- aCCCCCaaa------CCCCCU--CCUUCCCCUUU- -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 40525 | 0.81 | 0.123571 |
Target: 5'- aGGGGGgcgcGGGGGAGGGgAGGGGGc- -3' miRNA: 3'- aCCCCCaaa-CCCCCUCCU-UCCCCUuu -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 40564 | 0.81 | 0.123571 |
Target: 5'- aGGGGGgcgcGGGGGAGGGgAGGGGGc- -3' miRNA: 3'- aCCCCCaaa-CCCCCUCCU-UCCCCUuu -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 24735 | 0.81 | 0.111423 |
Target: 5'- aGGGGGgaagggaagGGGGGAagGGAAGGGGGGAa -3' miRNA: 3'- aCCCCCaaa------CCCCCU--CCUUCCCCUUU- -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 24852 | 0.81 | 0.111423 |
Target: 5'- aGGGGGgaagggaagGGGGGAagGGAAGGGGGGAa -3' miRNA: 3'- aCCCCCaaa------CCCCCU--CCUUCCCCUUU- -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 24813 | 0.81 | 0.111423 |
Target: 5'- aGGGGGgaagggaagGGGGGAagGGAAGGGGGGAa -3' miRNA: 3'- aCCCCCaaa------CCCCCU--CCUUCCCCUUU- -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 156256 | 0.8 | 0.144111 |
Target: 5'- aGGGGGacgggaGGGGGAcGGGAGGGGGAc -3' miRNA: 3'- aCCCCCaaa---CCCCCU-CCUUCCCCUUu -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 148682 | 0.8 | 0.130097 |
Target: 5'- cGaGGGGUgcgcGGGGGAGGGAGGGcGAGGg -3' miRNA: 3'- aC-CCCCAaa--CCCCCUCCUUCCC-CUUU- -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 6974 | 0.8 | 0.133478 |
Target: 5'- aGGGGGgggGGGGGGGGAaAGGGGu-- -3' miRNA: 3'- aCCCCCaaaCCCCCUCCU-UCCCCuuu -5' |
|||||||
21559 | 5' | -59.1 | NC_004812.1 | + | 6649 | 0.8 | 0.144111 |
Target: 5'- aGGGGGU--GGGGGAGauGGGGGAGAg -3' miRNA: 3'- aCCCCCAaaCCCCCUCcuUCCCCUUU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home