Results 81 - 100 of 297 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 65457 | 0.71 | 0.749794 |
Target: 5'- --uGCUGCGCGAGUGCggcuggACccccccgggccgaGCGCGCg -3' miRNA: 3'- guuCGGCGCGUUCAUGa-----UG-------------UGCGCGa -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 105116 | 0.71 | 0.730908 |
Target: 5'- -cGGCCGgGUAcgGGUAUUcgACGCGCGCg -3' miRNA: 3'- guUCGGCgCGU--UCAUGA--UGUGCGCGa -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 29297 | 0.71 | 0.740893 |
Target: 5'- gCGAGgCGCGCAgccGGggcccgaUGCACGCGCUc -3' miRNA: 3'- -GUUCgGCGCGU---UCaug----AUGUGCGCGA- -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 80319 | 0.71 | 0.730908 |
Target: 5'- --cGCCGCGCugcugGAGgcgGCcGCGCGCGCc -3' miRNA: 3'- guuCGGCGCG-----UUCa--UGaUGUGCGCGa -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 80633 | 0.71 | 0.730908 |
Target: 5'- uCGAGCUGCGCcgc--CUGCAgGCGCUg -3' miRNA: 3'- -GUUCGGCGCGuucauGAUGUgCGCGA- -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 79783 | 0.71 | 0.720835 |
Target: 5'- gCAGGCCGCGCccccggAGGUGCgcgccGCccuGCGCGCc -3' miRNA: 3'- -GUUCGGCGCG------UUCAUGa----UG---UGCGCGa -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 79554 | 0.71 | 0.720835 |
Target: 5'- cCGAGgCGCGCGAGcGCcucgcCGCGCGCg -3' miRNA: 3'- -GUUCgGCGCGUUCaUGau---GUGCGCGa -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 141460 | 0.7 | 0.802035 |
Target: 5'- cCAGGUCGUGCGGGgagcccccgaggcgACgcggccggACGCGCGCUa -3' miRNA: 3'- -GUUCGGCGCGUUCa-------------UGa-------UGUGCGCGA- -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 23497 | 0.7 | 0.769253 |
Target: 5'- gGGGCUGCugucgcacuacguGCGGGUGCUGCugGgGCc -3' miRNA: 3'- gUUCGGCG-------------CGUUCAUGAUGugCgCGa -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 28488 | 0.7 | 0.770213 |
Target: 5'- uGGGCCGCGgcgcCAAcGUGCgcuaccGCGCGCGCa -3' miRNA: 3'- gUUCGGCGC----GUU-CAUGa-----UGUGCGCGa -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 121343 | 0.7 | 0.816391 |
Target: 5'- cCAGGgCGCGCGccaUGUUGCACGCGCg -3' miRNA: 3'- -GUUCgGCGCGUuc-AUGAUGUGCGCGa -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 58753 | 0.7 | 0.807469 |
Target: 5'- gCGGGcCCGCGCAGG-AUgucCACGUGCUu -3' miRNA: 3'- -GUUC-GGCGCGUUCaUGau-GUGCGCGA- -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 7902 | 0.7 | 0.797463 |
Target: 5'- aGGGUCGCccGCAGGUgucggggGCUGCGgCGCGCg -3' miRNA: 3'- gUUCGGCG--CGUUCA-------UGAUGU-GCGCGa -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 98538 | 0.7 | 0.789135 |
Target: 5'- aCGAGCCGuCGCAGGgcgccgagggAgUcCACGCGCUc -3' miRNA: 3'- -GUUCGGC-GCGUUCa---------UgAuGUGCGCGA- -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 153400 | 0.7 | 0.789135 |
Target: 5'- --cGCCGCGCGccucGGgcccGCUGCGcCGCGCc -3' miRNA: 3'- guuCGGCGCGU----UCa---UGAUGU-GCGCGa -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 47171 | 0.7 | 0.789135 |
Target: 5'- cCAGGCCGCGCGGGUcacCUuaAUAUGCGa- -3' miRNA: 3'- -GUUCGGCGCGUUCAu--GA--UGUGCGCga -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 100019 | 0.7 | 0.788203 |
Target: 5'- --cGCCGCGCGAucGUcGCUGCAuggcggcCGCGCg -3' miRNA: 3'- guuCGGCGCGUU--CA-UGAUGU-------GCGCGa -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 114423 | 0.7 | 0.779743 |
Target: 5'- ---aCCGCGCGGGUggACgGCGCGUGCg -3' miRNA: 3'- guucGGCGCGUUCA--UGaUGUGCGCGa -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 153996 | 0.7 | 0.770213 |
Target: 5'- uGGGCCGCGgcgcCAAcGUGCgcuaccGCGCGCGCa -3' miRNA: 3'- gUUCGGCGC----GUU-CAUGa-----UGUGCGCGa -5' |
|||||||
21567 | 5' | -54.1 | NC_004812.1 | + | 14367 | 0.7 | 0.770213 |
Target: 5'- -cGGCCGCGCGGGcGCgGCG-GCGCa -3' miRNA: 3'- guUCGGCGCGUUCaUGaUGUgCGCGa -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home