miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
21808	3'	-47.2	NC_004827.1	+	5681	0.66	0.97888
	Target:  5'- aCAAACUGGCGCG-UACUGAAg---- -3' miRNA:   3'- aGUUUGGCCGUGCgAUGGUUUauacu -5'
21808	3'	-47.2	NC_004827.1	+	35962	0.66	0.969803
	Target:  5'- uUCAGACCGGCAUccaCUugUAcaaaGAUAUGc -3' miRNA:   3'- -AGUUUGGCCGUGc--GAugGU----UUAUACu -5'
21808	3'	-47.2	NC_004827.1	+	38738	0.67	0.958233
	Target:  5'- uUCAAACCGGCAU----CCAGAU-UGAg -3' miRNA:   3'- -AGUUUGGCCGUGcgauGGUUUAuACU- -5'
21808	3'	-47.2	NC_004827.1	+	34199	0.67	0.949017
	Target:  5'- -gGAAUUGGuCGCGgUGCCAAGUAuuuUGAg -3' miRNA:   3'- agUUUGGCC-GUGCgAUGGUUUAU---ACU- -5'
21808	3'	-47.2	NC_004827.1	+	31603	0.68	0.938543
	Target:  5'- uUCAcuAUCGGUuaauuGCGCUGCCAcg-GUGAa -3' miRNA:   3'- -AGUu-UGGCCG-----UGCGAUGGUuuaUACU- -5'
21808	3'	-47.2	NC_004827.1	+	40325	0.68	0.920412
	Target:  5'- aUAAACCGGCACGCcucaAUCAuAUuUGGu -3' miRNA:   3'- aGUUUGGCCGUGCGa---UGGUuUAuACU- -5'
21808	3'	-47.2	NC_004827.1	+	5909	0.69	0.906707
	Target:  5'- aCAuauACCGuCACGCUaACgGAAUAUGAa -3' miRNA:   3'- aGUu--UGGCcGUGCGA-UGgUUUAUACU- -5'
21808	3'	-47.2	NC_004827.1	+	40238	1.11	0.003618
	Target:  5'- aUCAAACCGGCACGCUACCAAAUAUGAu -3' miRNA:   3'- -AGUUUGGCCGUGCGAUGGUUUAUACU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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