Results 61 - 68 of 68 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. |
strand
|
Start Position | R_P_ratio# | P value |
| Predicted miRNA align pattern | |||||||
| 22711 | 5' | -59.5 | NC_005091.1 | + | 56974 | 0.68 | 0.404969 |
|
Target: 5'- aGGGCGUuCGCGGUgaugcucgaaugCGAcgcagagCGGGcCGGCCg -3' miRNA: 3'- -UCCGUAuGCGCCG------------GCUa------GCCU-GCCGG- -5' |
|||||||
| 22711 | 5' | -59.5 | NC_005091.1 | + | 21183 | 0.68 | 0.404969 |
|
Target: 5'- cAGGUAUGCGCGGCgCGAcugcgaguaUCGuGAauGCa -3' miRNA: 3'- -UCCGUAUGCGCCG-GCU---------AGC-CUgcCGg -5' |
|||||||
| 22711 | 5' | -59.5 | NC_005091.1 | + | 56444 | 0.68 | 0.413917 |
|
Target: 5'- uGGCGUAUGgGGCUucuGGcgGGACGGCa -3' miRNA: 3'- uCCGUAUGCgCCGG---CUagCCUGCCGg -5' |
|||||||
| 22711 | 5' | -59.5 | NC_005091.1 | + | 26132 | 0.68 | 0.413917 |
|
Target: 5'- cAGcGCGUGCGCGGCgagcUGAUCGcGcucgccACGGCg -3' miRNA: 3'- -UC-CGUAUGCGCCG----GCUAGC-C------UGCCGg -5' |
|||||||
| 22711 | 5' | -59.5 | NC_005091.1 | + | 7202 | 0.68 | 0.422074 |
|
Target: 5'- cGGCAgauggcgGCGCGuuaccuucgucuuGCCGGcagCGG-CGGCCg -3' miRNA: 3'- uCCGUa------UGCGC-------------CGGCUa--GCCuGCCGG- -5' |
|||||||
| 22711 | 5' | -59.5 | NC_005091.1 | + | 15844 | 0.67 | 0.440541 |
|
Target: 5'- cGGCAUGCGUGuuGCCGAgcugCGGuucaucgauacgaAUGGCg -3' miRNA: 3'- uCCGUAUGCGC--CGGCUa---GCC-------------UGCCGg -5' |
|||||||
| 22711 | 5' | -59.5 | NC_005091.1 | + | 31853 | 0.67 | 0.442412 |
|
Target: 5'- cGGCcUGCucgugccguggaaccCGGCCGccUCGGACGGCUc -3' miRNA: 3'- uCCGuAUGc--------------GCCGGCu-AGCCUGCCGG- -5' |
|||||||
| 22711 | 5' | -59.5 | NC_005091.1 | + | 16998 | 0.66 | 0.5298 |
|
Target: 5'- cGGCGUcuggUGgGGCUGggCGGACGGa- -3' miRNA: 3'- uCCGUAu---GCgCCGGCuaGCCUGCCgg -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home