Results 61 - 68 of 68 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value
|
| Predicted miRNA align pattern | |||||||
| 23209 | 3' | -52.7 | NC_005259.1 | + | 32872 | 0.72 | 0.5737 |
|
Target: 5'- uCGACGcgCGCggUGAUCGAUUCACCGg -3' miRNA: 3'- -GUUGCa-GUGgaACUGGCUGAGUGGCg -5' |
|||||||
| 23209 | 3' | -52.7 | NC_005259.1 | + | 31803 | 0.73 | 0.552205 |
|
Target: 5'- --uCGUCAUCgagcucGACCGACccCACCGCg -3' miRNA: 3'- guuGCAGUGGaa----CUGGCUGa-GUGGCG- -5' |
|||||||
| 23209 | 3' | -52.7 | NC_005259.1 | + | 44616 | 0.74 | 0.493518 |
|
Target: 5'- uUAGCGUugccgccguagguugCGCCUUGACCGguGC-CGCCGCc -3' miRNA: 3'- -GUUGCA---------------GUGGAACUGGC--UGaGUGGCG- -5' |
|||||||
| 23209 | 3' | -52.7 | NC_005259.1 | + | 13218 | 0.74 | 0.459305 |
|
Target: 5'- cCAGCGguggGCCUcGACCGGC-CACCGUg -3' miRNA: 3'- -GUUGCag--UGGAaCUGGCUGaGUGGCG- -5' |
|||||||
| 23209 | 3' | -52.7 | NC_005259.1 | + | 29454 | 0.76 | 0.401283 |
|
Target: 5'- cCAGCGUgACCUUGccgcCCGGCUCggcauggACCGCc -3' miRNA: 3'- -GUUGCAgUGGAACu---GGCUGAG-------UGGCG- -5' |
|||||||
| 23209 | 3' | -52.7 | NC_005259.1 | + | 6933 | 0.76 | 0.366717 |
|
Target: 5'- --cCGcCGCCUUGagGCCGAgCUCGCCGCc -3' miRNA: 3'- guuGCaGUGGAAC--UGGCU-GAGUGGCG- -5' |
|||||||
| 23209 | 3' | -52.7 | NC_005259.1 | + | 1350 | 0.76 | 0.366717 |
|
Target: 5'- gCAACGgUGCCUacugGGCCG-CUCGCCGCg -3' miRNA: 3'- -GUUGCaGUGGAa---CUGGCuGAGUGGCG- -5' |
|||||||
| 23209 | 3' | -52.7 | NC_005259.1 | + | 57499 | 1.12 | 0.001613 |
|
Target: 5'- uCAACGUCACCUUGACCGACUCACCGCa -3' miRNA: 3'- -GUUGCAGUGGAACUGGCUGAGUGGCG- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home