miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
23339	5'	-61.3	NC_005259.1	+	64191	0.69	0.309652
	Target:  5'- cGGgaucUUCCuCGaUGUCGaCCUCGCCGGUc -3' miRNA:   3'- aCCa---AAGG-GCaGCGGC-GGAGCGGCCA- -5'
23339	5'	-61.3	NC_005259.1	+	26117	0.69	0.302499
	Target:  5'- ------aCCGcCGCCGCCggUCGCCGGUc -3' miRNA:   3'- accaaagGGCaGCGGCGG--AGCGGCCA- -5'
23339	5'	-61.3	NC_005259.1	+	8294	0.7	0.27516
	Target:  5'- cGGgcaCCCGcacggaaaCGCCGCCUUGUCGGa -3' miRNA:   3'- aCCaaaGGGCa-------GCGGCGGAGCGGCCa -5'
23339	5'	-61.3	NC_005259.1	+	53240	0.77	0.085052
	Target:  5'- aGGUUcgcgccgccgacaCCGUCGCCGCCgcugUCGCCGGUg -3' miRNA:   3'- aCCAAag-----------GGCAGCGGCGG----AGCGGCCA- -5'
23339	5'	-61.3	NC_005259.1	+	58695	0.78	0.071517
	Target:  5'- gGGUcggCUCGUCGCCGCCgccgucaccaUCGCCGGg -3' miRNA:   3'- aCCAaa-GGGCAGCGGCGG----------AGCGGCCa -5'
23339	5'	-61.3	NC_005259.1	+	35502	0.83	0.035988
	Target:  5'- gGGUUggcCCCGUUGCCGCCgcCGCCGGg -3' miRNA:   3'- aCCAAa--GGGCAGCGGCGGa-GCGGCCa -5'
23339	5'	-61.3	NC_005259.1	+	3277	1.06	0.000613
	Target:  5'- gUGGUUUCCCGUCGCCGCCUCGCCGGUc -3' miRNA:   3'- -ACCAAAGGGCAGCGGCGGAGCGGCCA- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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