Results 61 - 65 of 65 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio #
|
P value |
| Predicted miRNA align pattern | |||||||
| 23354 | 3' | -63.8 | NC_005259.1 | + | 50239 | 0.66 | 0.359638 |
|
Target: 5'- aGCGCgggCGCGGaucGUGGCCAacgggcuacuCGCUGUc -3' miRNA: 3'- cUGCGa--GCGCCgc-CACCGGU----------GCGGCG- -5' |
|||||||
| 23354 | 3' | -63.8 | NC_005259.1 | + | 60671 | 0.66 | 0.359638 |
|
Target: 5'- uGACGCaCGCGuucugcaccgaGCGGUGGC-ACGCaccaaaGCa -3' miRNA: 3'- -CUGCGaGCGC-----------CGCCACCGgUGCGg-----CG- -5' |
|||||||
| 23354 | 3' | -63.8 | NC_005259.1 | + | 40120 | 0.66 | 0.367628 |
|
Target: 5'- uGCGCUCGUGGaauuGGcgGGCgAgcuCGCCGUc -3' miRNA: 3'- cUGCGAGCGCCg---CCa-CCGgU---GCGGCG- -5' |
|||||||
| 23354 | 3' | -63.8 | NC_005259.1 | + | 20057 | 0.66 | 0.367628 |
|
Target: 5'- cGAUGUcCGCuGCGGUGGCggucgucacCACGUCGa -3' miRNA: 3'- -CUGCGaGCGcCGCCACCG---------GUGCGGCg -5' |
|||||||
| 23354 | 3' | -63.8 | NC_005259.1 | + | 16812 | 0.66 | 0.383969 |
|
Target: 5'- cGCGCUCGgGGcCGG-GGUCAUGauCCGa -3' miRNA: 3'- cUGCGAGCgCC-GCCaCCGGUGC--GGCg -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home