miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
23456	5'	-50.7	NC_005259.1	+	27996	0.66	0.957795
	Target:  5'- uGGU-GCGgguGCCGggGCGGGGUCGCCGGg- -3' miRNA:   3'- -CCAgUGC---UGGC--UGUUCUAGCGGUUac -5'
23456	5'	-50.7	NC_005259.1	+	17341	0.66	0.957795
	Target:  5'- cGGUCaACGucGCCGuCGAGGUCGgCGGc- -3' miRNA:   3'- -CCAG-UGC--UGGCuGUUCUAGCgGUUac -5'
23456	5'	-50.7	NC_005259.1	+	15253	0.66	0.953639
	Target:  5'- -aUCugGACCGcuaccuCAaucAGGUCGCCGAc- -3' miRNA:   3'- ccAGugCUGGCu-----GU---UCUAGCGGUUac -5'
23456	5'	-50.7	NC_005259.1	+	9682	0.66	0.953639
	Target:  5'- --gCGCuGCCGGuCGAGGUCGCCGc-- -3' miRNA:   3'- ccaGUGcUGGCU-GUUCUAGCGGUuac -5'
23456	5'	-50.7	NC_005259.1	+	30003	0.66	0.949215
	Target:  5'- uGGUCACca-CGACAAGGUgaccacCGCCGGg- -3' miRNA:   3'- -CCAGUGcugGCUGUUCUA------GCGGUUac -5'
23456	5'	-50.7	NC_005259.1	+	16721	0.66	0.949215
	Target:  5'- aGGUCGCGcucugccucGCCacgcuCAAGAUCGCCc--- -3' miRNA:   3'- -CCAGUGC---------UGGcu---GUUCUAGCGGuuac -5'
23456	5'	-50.7	NC_005259.1	+	13830	0.66	0.965327
	Target:  5'- cGUgAUGACCGACGGGcacAUUGCCc--- -3' miRNA:   3'- cCAgUGCUGGCUGUUC---UAGCGGuuac -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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