miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
23456	5'	-50.7	NC_005259.1	+	57680	0.67	0.939548
	Target:  5'- cGGcCAauCGACCGugGccAGGUUGCCGGg- -3' miRNA:   3'- -CCaGU--GCUGGCugU--UCUAGCGGUUac -5'
23456	5'	-50.7	NC_005259.1	+	57954	0.68	0.90386
	Target:  5'- aGGcCAUGGCCcccaugguCGAGGUCGCCGGg- -3' miRNA:   3'- -CCaGUGCUGGcu------GUUCUAGCGGUUac -5'
23456	5'	-50.7	NC_005259.1	+	61492	0.73	0.668072
	Target:  5'- uGUCGCGACCGuuGAGG-CGCuCGGUGu -3' miRNA:   3'- cCAGUGCUGGCugUUCUaGCG-GUUAC- -5'
23456	5'	-50.7	NC_005259.1	+	61886	0.69	0.866611
	Target:  5'- -aUCACGACCucGAUAucagggguuAGGUCGCCGGUc -3' miRNA:   3'- ccAGUGCUGG--CUGU---------UCUAGCGGUUAc -5'
23456	5'	-50.7	NC_005259.1	+	63846	0.72	0.690043
	Target:  5'- aGGcaagCGCGuACCGGCGAGGUgGCCGGcUGg -3' miRNA:   3'- -CCa---GUGC-UGGCUGUUCUAgCGGUU-AC- -5'
23456	5'	-50.7	NC_005259.1	+	67406	0.68	0.896941
	Target:  5'- uGUCACgGGCCGACAccaucGGggUGCCGGg- -3' miRNA:   3'- cCAGUG-CUGGCUGU-----UCuaGCGGUUac -5'
23456	5'	-50.7	NC_005259.1	+	67829	0.68	0.90386
	Target:  5'- uGUCcuCGACCGGCAgcccggugagcGGGUCGaCCAAUc -3' miRNA:   3'- cCAGu-GCUGGCUGU-----------UCUAGC-GGUUAc -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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