miRNA display CGI

Results 61 - 67 of 67 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
23463	5'	-61.6	NC_005259.1	+	7193	0.67	0.42791
	Target:  5'- cCGGCCUgCGgacGCACCGGgCUgCGGUGGa- -3' miRNA:   3'- -GCCGGA-GC---CGUGGCUgGA-GCCGCUac -5'
23463	5'	-61.6	NC_005259.1	+	6410	0.66	0.483595
	Target:  5'- gGuGCCcugaugUGGC-CCGACCUCGcCGAUGu -3' miRNA:   3'- gC-CGGa-----GCCGuGGCUGGAGCcGCUAC- -5'
23463	5'	-61.6	NC_005259.1	+	4120	0.69	0.328871
	Target:  5'- gCGGCCUCGaCgugGCCaaGACCgUCGGCGAg- -3' miRNA:   3'- -GCCGGAGCcG---UGG--CUGG-AGCCGCUac -5'
23463	5'	-61.6	NC_005259.1	+	2048	0.67	0.42791
	Target:  5'- gCGGUCacCGGCACCGAgaCaCGGCGGUu -3' miRNA:   3'- -GCCGGa-GCCGUGGCUg-GaGCCGCUAc -5'
23463	5'	-61.6	NC_005259.1	+	2009	0.68	0.367998
	Target:  5'- gCGGCCaUCGgguggcGCACCGgcACCUCaGuGCGGUGg -3' miRNA:   3'- -GCCGG-AGC------CGUGGC--UGGAG-C-CGCUAC- -5'
23463	5'	-61.6	NC_005259.1	+	1251	0.77	0.093389
	Target:  5'- cCGGCCUCGGCAUC-ACCUCGGaucaCGAg- -3' miRNA:   3'- -GCCGGAGCCGUGGcUGGAGCC----GCUac -5'
23463	5'	-61.6	NC_005259.1	+	293	0.7	0.266399
	Target:  5'- gCGGCCUC-GCGCUGAUCUcgacCGGgGGUGc -3' miRNA:   3'- -GCCGGAGcCGUGGCUGGA----GCCgCUAC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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