miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
23479	5'	-50.9	NC_005259.1	+	62724	0.66	0.940327
	Target:  5'- gGGGAUcucGC-UCGAcCGGA--CCGGCGGCa -3' miRNA:   3'- -UCUUA---CGcAGCU-GCCUuuGGCUGUCG- -5'
23479	5'	-50.9	NC_005259.1	+	23657	0.66	0.945252
	Target:  5'- cGAcgGCGaCGGCuGGAccGCCGACcccgAGCa -3' miRNA:   3'- uCUuaCGCaGCUG-CCUu-UGGCUG----UCG- -5'
23479	5'	-50.9	NC_005259.1	+	4118	0.66	0.949903
	Target:  5'- cGGcgGCcUCGACGuGGccaaGACCGuCGGCg -3' miRNA:   3'- uCUuaCGcAGCUGC-CU----UUGGCuGUCG- -5'
23479	5'	-50.9	NC_005259.1	+	53623	0.66	0.954283
	Target:  5'- ----gGCGUCGAgCGGu-GCCGuuGGCc -3' miRNA:   3'- ucuuaCGCAGCU-GCCuuUGGCugUCG- -5'
23479	5'	-50.9	NC_005259.1	+	22311	0.66	0.954283
	Target:  5'- cAGA--GC-UCGGCGGAuacACCGAC-GCa -3' miRNA:   3'- -UCUuaCGcAGCUGCCUu--UGGCUGuCG- -5'
23479	5'	-50.9	NC_005259.1	+	58379	0.66	0.956783
	Target:  5'- uAGAGcUGCucCGACGGugcgcaccagccACCGGCGGCg -3' miRNA:   3'- -UCUU-ACGcaGCUGCCuu----------UGGCUGUCG- -5'
23479	5'	-50.9	NC_005259.1	+	33903	0.66	0.962249
	Target:  5'- ----cGCG-CGACGGGccgaGACCGGCcacggugcgAGCa -3' miRNA:   3'- ucuuaCGCaGCUGCCU----UUGGCUG---------UCG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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