Results 61 - 64 of 64 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
23562 | 3' | -54.8 | NC_005261.1 | + | 20179 | 0.67 | 0.8586 |
Target: 5'- -cUGCCGcgGCCGccaGCGCGGgCGUCg- -3' miRNA: 3'- uaACGGUa-CGGUa--UGUGCCgGCAGaa -5' |
|||||||
23562 | 3' | -54.8 | NC_005261.1 | + | 67458 | 0.67 | 0.8586 |
Target: 5'- --cGCCuucucGCCGUGCAUGGCC-UCa- -3' miRNA: 3'- uaaCGGua---CGGUAUGUGCCGGcAGaa -5' |
|||||||
23562 | 3' | -54.8 | NC_005261.1 | + | 136738 | 0.67 | 0.847991 |
Target: 5'- -cUGCCG-GCCGcggcgguggccuucUGCGCGGCCGcgCUg -3' miRNA: 3'- uaACGGUaCGGU--------------AUGUGCCGGCa-GAa -5' |
|||||||
23562 | 3' | -54.8 | NC_005261.1 | + | 101094 | 0.73 | 0.487914 |
Target: 5'- -gUGCCAUGCCAcucggUGcCACGGCCGgcgCg- -3' miRNA: 3'- uaACGGUACGGU-----AU-GUGCCGGCa--Gaa -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home