miRNA display CGI

Results 61 - 67 of 67 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
23766	3'	-60	NC_005261.1	+	24925	0.72	0.385146
	Target:  5'- cGGCGGCUGCaGccGCCGAGGggcAGGCUGg -3' miRNA:   3'- uUCGCUGACG-CacUGGCUCC---UCCGGC- -5'
23766	3'	-60	NC_005261.1	+	129661	0.73	0.323335
	Target:  5'- cGGCGGCagggGCGgGACCGGGGgcgucgcgacucGGGCCGg -3' miRNA:   3'- uUCGCUGa---CGCaCUGGCUCC------------UCCGGC- -5'
23766	3'	-60	NC_005261.1	+	114348	0.73	0.316149
	Target:  5'- cGAGCGGC-GCGUGGCCGcggccgagucGGuGGCCGa -3' miRNA:   3'- -UUCGCUGaCGCACUGGCu---------CCuCCGGC- -5'
23766	3'	-60	NC_005261.1	+	53592	0.73	0.316149
	Target:  5'- cGGCGGCgccccaGCG-GACCGAcGAGGCCGu -3' miRNA:   3'- uUCGCUGa-----CGCaCUGGCUcCUCCGGC- -5'
23766	3'	-60	NC_005261.1	+	14974	0.73	0.316149
	Target:  5'- gGGGCGACUGCGcGGCCGcGccGGCCGc -3' miRNA:   3'- -UUCGCUGACGCaCUGGCuCcuCCGGC- -5'
23766	3'	-60	NC_005261.1	+	89760	0.75	0.233618
	Target:  5'- cAAGCuGAacgcCGUGGCCGAGGAGGCCc -3' miRNA:   3'- -UUCG-CUgac-GCACUGGCUCCUCCGGc -5'
23766	3'	-60	NC_005261.1	+	107729	0.79	0.135461
	Target:  5'- cAGGCGGCUGCGccucGGCCGcggGGGGGGCCa -3' miRNA:   3'- -UUCGCUGACGCa---CUGGC---UCCUCCGGc -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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