Results 81 - 83 of 83 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
23773 | 5' | -58.7 | NC_005261.1 | + | 104831 | 0.66 | 0.741524 |
Target: 5'- gUCGcggGGcCGCGCCaCGCGGACcGCgCGGg -3' miRNA: 3'- aAGUa--CCaGUGCGG-GCGUCUG-CG-GCU- -5' |
|||||||
23773 | 5' | -58.7 | NC_005261.1 | + | 2399 | 0.66 | 0.751165 |
Target: 5'- ----cGGcgagCGCGCCCGCGGGCcCCGc -3' miRNA: 3'- aaguaCCa---GUGCGGGCGUCUGcGGCu -5' |
|||||||
23773 | 5' | -58.7 | NC_005261.1 | + | 59367 | 0.66 | 0.780349 |
Target: 5'- ----gGGUguCGCCCGCcagcgcccgcgccacGGCGCCGAg -3' miRNA: 3'- aaguaCCAguGCGGGCGu--------------CUGCGGCU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home