Results 41 - 60 of 433 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 80103 | 0.82 | 0.118983 |
Target: 5'- gCGCCGCGGUACCGGcuuGGGCGCCGcGGc -3' miRNA: 3'- gGCGGCGCCGUGGUC---CUUGUGGCaCC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 123463 | 0.83 | 0.101426 |
Target: 5'- gCCGUCGCGGgccucccagaacucCACCAGGGACACCG-GGc -3' miRNA: 3'- -GGCGGCGCC--------------GUGGUCCUUGUGGCaCC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 95748 | 0.83 | 0.099633 |
Target: 5'- gCCGCCGCcGcCGCCGGGGGCGCCG-GGa -3' miRNA: 3'- -GGCGGCGcC-GUGGUCCUUGUGGCaCC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 44875 | 0.83 | 0.08995 |
Target: 5'- gCCGCCGCGaGCGCCgcgGGGAugGCCG-GGg -3' miRNA: 3'- -GGCGGCGC-CGUGG---UCCUugUGGCaCC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 68756 | 0.85 | 0.075119 |
Target: 5'- cCCGCCGgGGCGCCGcGGAGCcGCCGUGu -3' miRNA: 3'- -GGCGGCgCCGUGGU-CCUUG-UGGCACc -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 103862 | 0.77 | 0.214517 |
Target: 5'- gCCGCgGCGGCGgCGGGGcgGCGCCGccGGg -3' miRNA: 3'- -GGCGgCGCCGUgGUCCU--UGUGGCa-CC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 93678 | 0.77 | 0.219666 |
Target: 5'- -gGCgGCGGCGCCGgcGGGGCGCCGgcgGGu -3' miRNA: 3'- ggCGgCGCCGUGGU--CCUUGUGGCa--CC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 83489 | 0.76 | 0.247014 |
Target: 5'- gCCGCCGUaGaGCGCCAGGcgcgcGCGCCgGUGGa -3' miRNA: 3'- -GGCGGCG-C-CGUGGUCCu----UGUGG-CACC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 16263 | 0.76 | 0.24644 |
Target: 5'- gCCGCCGgGGCcgggcuucggcucGCCcggGGGGGCGCCGUcGGg -3' miRNA: 3'- -GGCGGCgCCG-------------UGG---UCCUUGUGGCA-CC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 94078 | 0.77 | 0.241328 |
Target: 5'- aCCGCCGC--CGCCGGGAACGCCGc-- -3' miRNA: 3'- -GGCGGCGccGUGGUCCUUGUGGCacc -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 33585 | 0.77 | 0.241328 |
Target: 5'- gCC-CCGCGaGCACCAGGGgcgGCGCCGgcgcGGg -3' miRNA: 3'- -GGcGGCGC-CGUGGUCCU---UGUGGCa---CC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 43796 | 0.77 | 0.23575 |
Target: 5'- gCGCCGCgggugagggGGCGCCGGGcGCGCCcuccGUGGa -3' miRNA: 3'- gGCGGCG---------CCGUGGUCCuUGUGG----CACC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 98129 | 0.77 | 0.235199 |
Target: 5'- aCGCCGCGGCACCGGcGGCcgucggcggcaagGCCGcGGg -3' miRNA: 3'- gGCGGCGCCGUGGUCcUUG-------------UGGCaCC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 102947 | 0.77 | 0.230282 |
Target: 5'- gCCGCUGCGGCggcgGCCGcGGGCGCCGcGGg -3' miRNA: 3'- -GGCGGCGCCG----UGGUcCUUGUGGCaCC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 2604 | 0.77 | 0.230282 |
Target: 5'- gCCGCCGuCGGCGgCGGGGcCGCCG-GGc -3' miRNA: 3'- -GGCGGC-GCCGUgGUCCUuGUGGCaCC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 29240 | 0.77 | 0.224921 |
Target: 5'- aCGCCGCGGCGCCGcgcgacGGGcCGCCGccgcUGGa -3' miRNA: 3'- gGCGGCGCCGUGGU------CCUuGUGGC----ACC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 8829 | 0.77 | 0.224921 |
Target: 5'- cCCGCCG-GGCAagggggCGGGGACagGCCGUGGg -3' miRNA: 3'- -GGCGGCgCCGUg-----GUCCUUG--UGGCACC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 53030 | 0.77 | 0.224921 |
Target: 5'- gCUuCCGCGGCGCCGGGGcaGCCGUcGGg -3' miRNA: 3'- -GGcGGCGCCGUGGUCCUugUGGCA-CC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 31681 | 0.77 | 0.221756 |
Target: 5'- -gGCCGCGGCGCgGcGGcggcugaucgugaucGACGCCGUGGa -3' miRNA: 3'- ggCGGCGCCGUGgU-CC---------------UUGUGGCACC- -5' |
|||||||
23793 | 5' | -59.5 | NC_005261.1 | + | 81518 | 0.77 | 0.219666 |
Target: 5'- gCCGCCGcCGGCGCCAGGcGCugCa-GGa -3' miRNA: 3'- -GGCGGC-GCCGUGGUCCuUGugGcaCC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home