Results 41 - 42 of 42 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
24070 | 5' | -54.1 | NC_005262.1 | + | 62694 | 0.68 | 0.673459 |
Target: 5'- aGGCGGCGgaACCGGUggCAGUAAucGGuACg -3' miRNA: 3'- -UCGUCGU--UGGCCGagGUCAUUu-CC-UG- -5' |
|||||||
24070 | 5' | -54.1 | NC_005262.1 | + | 62758 | 0.68 | 0.673459 |
Target: 5'- cGCAGCAuUCGGCacgugggucgCCAGcGAGGGAUu -3' miRNA: 3'- uCGUCGUuGGCCGa---------GGUCaUUUCCUG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home