miRNA display CGI

Results 101 - 107 of 107 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
24094	3'	-56.3	NC_005262.1	+	59179	0.66	0.693288
	Target:  5'- -aGCAGCucacgggcccgcuGAugGAGCGCCuuGCgaaGUCGGg -3' miRNA:   3'- caCGUCGu------------CUugCUCGCGG--CG---UAGCU- -5'
24094	3'	-56.3	NC_005262.1	+	60438	0.67	0.588785
	Target:  5'- cGUGCGGCAucuAGCGAGCcGCgGCcUCGu -3' miRNA:   3'- -CACGUCGUc--UUGCUCG-CGgCGuAGCu -5'
24094	3'	-56.3	NC_005262.1	+	60989	0.67	0.632394
	Target:  5'- -gGC-GCAGGugGAGCGCCugacggacauGCugAUCGAc -3' miRNA:   3'- caCGuCGUCUugCUCGCGG----------CG--UAGCU- -5'
24094	3'	-56.3	NC_005262.1	+	61076	0.72	0.336697
	Target:  5'- -gGC-GCAGGGCGAGCGCuacCGCAaCGAc -3' miRNA:   3'- caCGuCGUCUUGCUCGCG---GCGUaGCU- -5'
24094	3'	-56.3	NC_005262.1	+	61133	0.67	0.610553
	Target:  5'- -gGCGGcCAGGACGccgcccGGCGCCGCGc--- -3' miRNA:   3'- caCGUC-GUCUUGC------UCGCGGCGUagcu -5'
24094	3'	-56.3	NC_005262.1	+	61583	0.67	0.610553
	Target:  5'- -aGCGGCuucGAcGCGAuGUGCCGCGcgaUCGAa -3' miRNA:   3'- caCGUCGu--CU-UGCU-CGCGGCGU---AGCU- -5'
24094	3'	-56.3	NC_005262.1	+	63235	0.66	0.675994
	Target:  5'- -aGCGGUuGGGCGAGCGgUCGCGcaCGAa -3' miRNA:   3'- caCGUCGuCUUGCUCGC-GGCGUa-GCU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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