miRNA display CGI

Results 101 - 107 of 107 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
24094	3'	-56.3	NC_005262.1	+	45806	0.67	0.610553
	Target:  5'- -gGCAGCcacgucgaAGAACGugcgcacuuccGGCGCUGCGUcCGAu -3' miRNA:   3'- caCGUCG--------UCUUGC-----------UCGCGGCGUA-GCU- -5'
24094	3'	-56.3	NC_005262.1	+	52344	0.67	0.610553
	Target:  5'- -cGCGGUAGGcacgaugcGCGGGCGCgGCGugUCGc -3' miRNA:   3'- caCGUCGUCU--------UGCUCGCGgCGU--AGCu -5'
24094	3'	-56.3	NC_005262.1	+	61583	0.67	0.610553
	Target:  5'- -aGCGGCuucGAcGCGAuGUGCCGCGcgaUCGAa -3' miRNA:   3'- caCGUCGu--CU-UGCU-CGCGGCGU---AGCU- -5'
24094	3'	-56.3	NC_005262.1	+	55747	0.67	0.610553
	Target:  5'- -cGCucaccCAGAACGcGCGCUGCGUCa- -3' miRNA:   3'- caCGuc---GUCUUGCuCGCGGCGUAGcu -5'
24094	3'	-56.3	NC_005262.1	+	9673	0.67	0.621469
	Target:  5'- -aGCgAGUAGGcgaGGGCGCCGUcgacGUCGAg -3' miRNA:   3'- caCG-UCGUCUug-CUCGCGGCG----UAGCU- -5'
24094	3'	-56.3	NC_005262.1	+	52181	0.67	0.621469
	Target:  5'- gGUGCagggGGCAGAGCGGGaucguguggaaGUCGC-UCGAg -3' miRNA:   3'- -CACG----UCGUCUUGCUCg----------CGGCGuAGCU- -5'
24094	3'	-56.3	NC_005262.1	+	22632	0.66	0.69759
	Target:  5'- -cGCGGCGGugcccuccuGCGcGCGCUGCA-CGGu -3' miRNA:   3'- caCGUCGUCu--------UGCuCGCGGCGUaGCU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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