Results 101 - 108 of 108 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value
|
| Predicted miRNA align pattern | |||||||
| 24105 | 3' | -64.8 | NC_005262.1 | + | 4888 | 0.66 | 0.337051 |
|
Target: 5'- cGGuCGGGCcgccGGcCUGAuCGcGCaGCGCGGCa -3' miRNA: 3'- -CC-GCCCGc---UC-GACU-GCcCG-CGCGCCG- -5' |
|||||||
| 24105 | 3' | -64.8 | NC_005262.1 | + | 30859 | 0.66 | 0.337051 |
|
Target: 5'- cGGuCGGaGCGAucgugaaggcGCUGGCGaGcGuCGCGCGuGCg -3' miRNA: 3'- -CC-GCC-CGCU----------CGACUGC-C-C-GCGCGC-CG- -5' |
|||||||
| 24105 | 3' | -64.8 | NC_005262.1 | + | 44147 | 0.66 | 0.337051 |
|
Target: 5'- cGGcCGGacGCGcGCgcGAuCGGGCaggaGCGCGGCg -3' miRNA: 3'- -CC-GCC--CGCuCGa-CU-GCCCG----CGCGCCG- -5' |
|||||||
| 24105 | 3' | -64.8 | NC_005262.1 | + | 62511 | 0.66 | 0.337051 |
|
Target: 5'- cGGgGGGCGuccuGCUGGCGaaaaucgccGGCcuuuGgGCGGUu -3' miRNA: 3'- -CCgCCCGCu---CGACUGC---------CCG----CgCGCCG- -5' |
|||||||
| 24105 | 3' | -64.8 | NC_005262.1 | + | 61460 | 0.66 | 0.337051 |
|
Target: 5'- cGGCGGacgGCGAagcGCUaGACGacaucuuCGCGCGGCc -3' miRNA: 3'- -CCGCC---CGCU---CGA-CUGCcc-----GCGCGCCG- -5' |
|||||||
| 24105 | 3' | -64.8 | NC_005262.1 | + | 61643 | 0.66 | 0.337051 |
|
Target: 5'- --aGGGCGAGgaGGaagugcuguacCGcGGCGCGCuggaGGCg -3' miRNA: 3'- ccgCCCGCUCgaCU-----------GC-CCGCGCG----CCG- -5' |
|||||||
| 24105 | 3' | -64.8 | NC_005262.1 | + | 5138 | 0.66 | 0.337051 |
|
Target: 5'- -aCGGGCGGcGCUGAUccugcucGGCGCGCugaucGGUg -3' miRNA: 3'- ccGCCCGCU-CGACUGc------CCGCGCG-----CCG- -5' |
|||||||
| 24105 | 3' | -64.8 | NC_005262.1 | + | 24136 | 0.66 | 0.344637 |
|
Target: 5'- uGCGGGUGAcGUucgagGAUGGGCG-GCaggaGGCg -3' miRNA: 3'- cCGCCCGCU-CGa----CUGCCCGCgCG----CCG- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home