miRNA display CGI

Results 121 - 127 of 127 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
24340	5'	-58.6	NC_005264.1	+	157225	0.66	0.851757
	Target:  5'- gCGUCGCGcGGCCCGauagcggCUCCGgucGCCg -3' miRNA:   3'- -GCGGCGUcUUGGGCa------GAGGCaucCGG- -5'
24340	5'	-58.6	NC_005264.1	+	3074	0.66	0.854791
	Target:  5'- uCGCCGCgacuggcggcggccgAGGACCCGUUcgggcgauUCCc--GGCCc -3' miRNA:   3'- -GCGGCG---------------UCUUGGGCAG--------AGGcauCCGG- -5'
24340	5'	-58.6	NC_005264.1	+	122101	0.66	0.854791
	Target:  5'- uCGCCGCgacuggcggcggccgAGGACCCGUUcgggcgauUCCc--GGCCc -3' miRNA:   3'- -GCGGCG---------------UCUUGGGCAG--------AGGcauCCGG- -5'
24340	5'	-58.6	NC_005264.1	+	146977	0.66	0.857047
	Target:  5'- gGCUGCGGAGCCUc-CUCgagaaucuuuagcaCGUGGGCg -3' miRNA:   3'- gCGGCGUCUUGGGcaGAG--------------GCAUCCGg -5'
24340	5'	-58.6	NC_005264.1	+	158997	0.66	0.858541
	Target:  5'- cCGgCGCAGGACCCaugccaggagcagGUCUCCGcgcGCa -3' miRNA:   3'- -GCgGCGUCUUGGG-------------CAGAGGCaucCGg -5'
24340	5'	-58.6	NC_005264.1	+	98306	0.66	0.859285
	Target:  5'- -aUCGCGGAACCCccCUCCGc-GGCg -3' miRNA:   3'- gcGGCGUCUUGGGcaGAGGCauCCGg -5'
24340	5'	-58.6	NC_005264.1	+	147698	0.66	0.859285
	Target:  5'- uCGCCGCAcgcGAuuGCCCGUgUCgGUAGa-- -3' miRNA:   3'- -GCGGCGU---CU--UGGGCAgAGgCAUCcgg -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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