Results 101 - 120 of 127 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value![]() |
Predicted miRNA align pattern | |||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 124047 | 0.7 | 0.602443 |
Target: 5'- uCGCCGCGGAGuaCGUCaCCGggacgAGGCa -3' miRNA: 3'- -GCGGCGUCUUggGCAGaGGCa----UCCGg -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 105888 | 0.71 | 0.582738 |
Target: 5'- -aCCGCGGAuucuacaugaaACCCGUCgccCCGUGcGCCa -3' miRNA: 3'- gcGGCGUCU-----------UGGGCAGa--GGCAUcCGG- -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 82012 | 0.71 | 0.582738 |
Target: 5'- gGCCGCAGAGaugUCGUCUuuGUcccaaGGGUCu -3' miRNA: 3'- gCGGCGUCUUg--GGCAGAggCA-----UCCGG- -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 16437 | 0.71 | 0.582738 |
Target: 5'- uGCCGCGGGGCCUG-C-CCGcGGGUg -3' miRNA: 3'- gCGGCGUCUUGGGCaGaGGCaUCCGg -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 46758 | 0.71 | 0.582738 |
Target: 5'- cCGUCGCAGGACCagaUCUUCGcuUGGGCg -3' miRNA: 3'- -GCGGCGUCUUGGgc-AGAGGC--AUCCGg -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 65163 | 0.71 | 0.572931 |
Target: 5'- cCGCgGCGGcGCCC-UCUCUGgccauGGCCg -3' miRNA: 3'- -GCGgCGUCuUGGGcAGAGGCau---CCGG- -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 23427 | 0.71 | 0.572931 |
Target: 5'- aCGCCaGCGGuGCCCGUCUCg--AGuGCCc -3' miRNA: 3'- -GCGG-CGUCuUGGGCAGAGgcaUC-CGG- -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 2728 | 0.71 | 0.572931 |
Target: 5'- cCGCgGCcGGGCCCGUCUUC-UAGGUUu -3' miRNA: 3'- -GCGgCGuCUUGGGCAGAGGcAUCCGG- -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 53738 | 0.71 | 0.563164 |
Target: 5'- uCGUCGU---GCCCGUCUCCGgc-GCCg -3' miRNA: 3'- -GCGGCGucuUGGGCAGAGGCaucCGG- -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 43284 | 0.71 | 0.553443 |
Target: 5'- aCGCCGCGGGucugAUCgGUCggCC-UGGGCCa -3' miRNA: 3'- -GCGGCGUCU----UGGgCAGa-GGcAUCCGG- -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 115987 | 0.71 | 0.553443 |
Target: 5'- aGUgGCGGAACCCuUCUgUG-AGGCCg -3' miRNA: 3'- gCGgCGUCUUGGGcAGAgGCaUCCGG- -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 162311 | 0.71 | 0.553443 |
Target: 5'- aCGCCGCGGGucugAUCgGUCggCC-UGGGCCa -3' miRNA: 3'- -GCGGCGUCU----UGGgCAGa-GGcAUCCGG- -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 36067 | 0.71 | 0.543771 |
Target: 5'- uGCCGacgcggAGAGCCCGUUUCCG-AGGaCg -3' miRNA: 3'- gCGGCg-----UCUUGGGCAGAGGCaUCCgG- -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 155094 | 0.71 | 0.543771 |
Target: 5'- uGCCGacgcggAGAGCCCGUUUCCG-AGGaCg -3' miRNA: 3'- gCGGCg-----UCUUGGGCAGAGGCaUCCgG- -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 67634 | 0.71 | 0.542808 |
Target: 5'- gGgCGCAGGgguguccugcgcgGCCCGUCUUCGUuauGGCa -3' miRNA: 3'- gCgGCGUCU-------------UGGGCAGAGGCAu--CCGg -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 152919 | 0.72 | 0.534156 |
Target: 5'- gCGCCGCAaAGCCCGcagucgcgagUCcCCGaAGGCCc -3' miRNA: 3'- -GCGGCGUcUUGGGC----------AGaGGCaUCCGG- -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 138384 | 0.72 | 0.524602 |
Target: 5'- cCGCCGCGGAacaaGCCaGUCgCUaUGGGCCa -3' miRNA: 3'- -GCGGCGUCU----UGGgCAGaGGcAUCCGG- -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 122300 | 0.72 | 0.515113 |
Target: 5'- aGCCGCAGcGCCaCGUC-CC-UGGGCg -3' miRNA: 3'- gCGGCGUCuUGG-GCAGaGGcAUCCGg -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 3273 | 0.72 | 0.515113 |
Target: 5'- aGCCGCAGcGCCaCGUC-CC-UGGGCg -3' miRNA: 3'- gCGGCGUCuUGG-GCAGaGGcAUCCGg -5' |
|||||||
24340 | 5' | -58.6 | NC_005264.1 | + | 149136 | 0.72 | 0.515113 |
Target: 5'- aGCCGCAcGAGCUgccaGuUCUCCcUGGGCCa -3' miRNA: 3'- gCGGCGU-CUUGGg---C-AGAGGcAUCCGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home