Results 61 - 64 of 64 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value![]() |
Predicted miRNA align pattern | |||||||
24400 | 5' | -53.6 | NC_005264.1 | + | 90743 | 0.66 | 0.965569 |
Target: 5'- cGAGAG-AUACGCGGCcauuacgaccgcgaCCaGCACgUCGu -3' miRNA: 3'- -UUUUCuUAUGCGCCG--------------GGaCGUGgAGC- -5' |
|||||||
24400 | 5' | -53.6 | NC_005264.1 | + | 48340 | 0.66 | 0.966551 |
Target: 5'- uGGGGAGUugGCGcacGCCaugGCgGCCUCGu -3' miRNA: 3'- uUUUCUUAugCGC---CGGga-CG-UGGAGC- -5' |
|||||||
24400 | 5' | -53.6 | NC_005264.1 | + | 133353 | 0.66 | 0.966551 |
Target: 5'- uAGAGAc--CGCGGCCCU---CCUCGa -3' miRNA: 3'- uUUUCUuauGCGCCGGGAcguGGAGC- -5' |
|||||||
24400 | 5' | -53.6 | NC_005264.1 | + | 17046 | 0.66 | 0.966551 |
Target: 5'- ---uGAGUACucuGCGGUCCUuauucGCGCaCUCGg -3' miRNA: 3'- uuuuCUUAUG---CGCCGGGA-----CGUG-GAGC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home