Results 61 - 64 of 64 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. |
strand![]() |
Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
24400 | 5' | -53.6 | NC_005264.1 | + | 51770 | 0.67 | 0.927835 |
Target: 5'- gAAGGGGAgcucGCGCGGCg--GCACUUCGu -3' miRNA: 3'- -UUUUCUUa---UGCGCCGggaCGUGGAGC- -5' |
|||||||
24400 | 5' | -53.6 | NC_005264.1 | + | 154345 | 0.67 | 0.922301 |
Target: 5'- -cAAGAucUGCGcCGGCCCacucUGCugCUUGg -3' miRNA: 3'- uuUUCUu-AUGC-GCCGGG----ACGugGAGC- -5' |
|||||||
24400 | 5' | -53.6 | NC_005264.1 | + | 9681 | 0.67 | 0.922301 |
Target: 5'- uGGGGGAgGCG-GGCUC-GCGCCUCGa -3' miRNA: 3'- uUUUCUUaUGCgCCGGGaCGUGGAGC- -5' |
|||||||
24400 | 5' | -53.6 | NC_005264.1 | + | 133353 | 0.66 | 0.966551 |
Target: 5'- uAGAGAc--CGCGGCCCU---CCUCGa -3' miRNA: 3'- uUUUCUuauGCGCCGGGAcguGGAGC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home