Results 61 - 69 of 69 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
24422 | 5' | -58 | NC_005264.1 | + | 154897 | 0.73 | 0.483473 |
Target: 5'- aAAGaCGCCgcggcCGUGGACGAcGCGugGAc -3' miRNA: 3'- gUUC-GCGGa----GCACCUGCUcCGCugCU- -5' |
|||||||
24422 | 5' | -58 | NC_005264.1 | + | 56920 | 0.73 | 0.465112 |
Target: 5'- gGGGCGgCguacgugCGUGGcgcACGGGGCGACGGg -3' miRNA: 3'- gUUCGCgGa------GCACC---UGCUCCGCUGCU- -5' |
|||||||
24422 | 5' | -58 | NC_005264.1 | + | 37250 | 0.74 | 0.438271 |
Target: 5'- gGGGCGCaucacCGUGGACGAGGCGcuccugcCGAa -3' miRNA: 3'- gUUCGCGga---GCACCUGCUCCGCu------GCU- -5' |
|||||||
24422 | 5' | -58 | NC_005264.1 | + | 156277 | 0.74 | 0.438271 |
Target: 5'- gGGGCGCaucacCGUGGACGAGGCGcuccugcCGAa -3' miRNA: 3'- gUUCGCGga---GCACCUGCUCCGCu------GCU- -5' |
|||||||
24422 | 5' | -58 | NC_005264.1 | + | 19424 | 0.75 | 0.387377 |
Target: 5'- gAGGCGCCgggUGUGGccGCGGGGCG-CGGg -3' miRNA: 3'- gUUCGCGGa--GCACC--UGCUCCGCuGCU- -5' |
|||||||
24422 | 5' | -58 | NC_005264.1 | + | 8290 | 0.76 | 0.34053 |
Target: 5'- aAGGCGCC-CGUGGGCGAcGGgGGCa- -3' miRNA: 3'- gUUCGCGGaGCACCUGCU-CCgCUGcu -5' |
|||||||
24422 | 5' | -58 | NC_005264.1 | + | 127317 | 0.76 | 0.34053 |
Target: 5'- aAGGCGCC-CGUGGGCGAcGGgGGCa- -3' miRNA: 3'- gUUCGCGGaGCACCUGCU-CCgCUGcu -5' |
|||||||
24422 | 5' | -58 | NC_005264.1 | + | 25926 | 0.82 | 0.134405 |
Target: 5'- gGGGCGCUguaGcGGACGAGGCGACGAa -3' miRNA: 3'- gUUCGCGGag-CaCCUGCUCCGCUGCU- -5' |
|||||||
24422 | 5' | -58 | NC_005264.1 | + | 99979 | 1.08 | 0.002386 |
Target: 5'- cCAAGCGCCUCGUGGACGAGGCGACGAa -3' miRNA: 3'- -GUUCGCGGAGCACCUGCUCCGCUGCU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home