Results 41 - 46 of 46 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value
|
| Predicted miRNA align pattern | |||||||
| 24471 | 3' | -51 | NC_005264.1 | + | 12903 | 0.71 | 0.888311 |
|
Target: 5'- ----cGAGCCGCCCGGccucgcAGUCCUCCc- -3' miRNA: 3'- cuaucUUUGGCGGGUU------UCAGGAGGug -5' |
|||||||
| 24471 | 3' | -51 | NC_005264.1 | + | 87523 | 0.74 | 0.787553 |
|
Target: 5'- cGAUcGAugAGCCGCCCGcggccuccgagGAGUCgUCCGCa -3' miRNA: 3'- -CUAuCU--UUGGCGGGU-----------UUCAGgAGGUG- -5' |
|||||||
| 24471 | 3' | -51 | NC_005264.1 | + | 16021 | 0.74 | 0.758353 |
|
Target: 5'- ---cGAGACCGCCCAaaaugagcaGAGUCaaagcuaUCCACa -3' miRNA: 3'- cuauCUUUGGCGGGU---------UUCAGg------AGGUG- -5' |
|||||||
| 24471 | 3' | -51 | NC_005264.1 | + | 159745 | 0.79 | 0.518137 |
|
Target: 5'- --cGGGAAUCGCCCGAacgGGUCCUCgGCc -3' miRNA: 3'- cuaUCUUUGGCGGGUU---UCAGGAGgUG- -5' |
|||||||
| 24471 | 3' | -51 | NC_005264.1 | + | 40719 | 0.79 | 0.518137 |
|
Target: 5'- --cGGGAAUCGCCCGAacgGGUCCUCgGCc -3' miRNA: 3'- cuaUCUUUGGCGGGUU---UCAGGAGgUG- -5' |
|||||||
| 24471 | 3' | -51 | NC_005264.1 | + | 58986 | 1.09 | 0.007971 |
|
Target: 5'- aGAUAGAAACCGCCCAAAGUCCUCCACc -3' miRNA: 3'- -CUAUCUUUGGCGGGUUUCAGGAGGUG- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home