Results 61 - 63 of 63 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value![]() |
Predicted miRNA align pattern | |||||||
24488 | 5' | -56 | NC_005264.1 | + | 98431 | 0.76 | 0.39773 |
Target: 5'- ----cGUGCCCGCGGCG-UCGgccuugGCCg -3' miRNA: 3'- guuucCACGGGCGCCGCuAGCaa----CGG- -5' |
|||||||
24488 | 5' | -56 | NC_005264.1 | + | 33080 | 0.78 | 0.334078 |
Target: 5'- ---cGGUGCCCGgGGCGGauuUCGUgcauaucgUGCCa -3' miRNA: 3'- guuuCCACGGGCgCCGCU---AGCA--------ACGG- -5' |
|||||||
24488 | 5' | -56 | NC_005264.1 | + | 44770 | 1.12 | 0.001973 |
Target: 5'- cCAAAGGUGCCCGCGGCGAUCGUUGCCg -3' miRNA: 3'- -GUUUCCACGGGCGCCGCUAGCAACGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home