Results 61 - 69 of 69 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value
|
| Predicted miRNA align pattern | |||||||
| 24549 | 3' | -53.6 | NC_005264.1 | + | 56077 | 0.72 | 0.77549 |
|
Target: 5'- gGCgGCCGCAggaUCUGAGGCCUGUUgCGc -3' miRNA: 3'- -CG-CGGCGUagcAGGCUUCGGAUAA-GC- -5' |
|||||||
| 24549 | 3' | -53.6 | NC_005264.1 | + | 21345 | 0.73 | 0.737102 |
|
Target: 5'- uGCGCUGCcguUCGUCCcGGGCCgccUCGg -3' miRNA: 3'- -CGCGGCGu--AGCAGGcUUCGGauaAGC- -5' |
|||||||
| 24549 | 3' | -53.6 | NC_005264.1 | + | 17098 | 0.74 | 0.656502 |
|
Target: 5'- cCGCCGcCAUCGUCCGcGGCCga--CGg -3' miRNA: 3'- cGCGGC-GUAGCAGGCuUCGGauaaGC- -5' |
|||||||
| 24549 | 3' | -53.6 | NC_005264.1 | + | 123463 | 0.75 | 0.635979 |
|
Target: 5'- aCGUCGuCAUCGUCUGAGGCCUcuggcugcgcgAUUCu -3' miRNA: 3'- cGCGGC-GUAGCAGGCUUCGGA-----------UAAGc -5' |
|||||||
| 24549 | 3' | -53.6 | NC_005264.1 | + | 158590 | 0.75 | 0.635979 |
|
Target: 5'- aCGUCGuCAUCGUCUGAGGCCUcuggcugcgcgAUUCu -3' miRNA: 3'- cGCGGC-GUAGCAGGCUUCGGA-----------UAAGc -5' |
|||||||
| 24549 | 3' | -53.6 | NC_005264.1 | + | 124182 | 0.75 | 0.625709 |
|
Target: 5'- uCGCCGuCGUCGUCgGugccGGCCUcgUCGg -3' miRNA: 3'- cGCGGC-GUAGCAGgCu---UCGGAuaAGC- -5' |
|||||||
| 24549 | 3' | -53.6 | NC_005264.1 | + | 157871 | 0.75 | 0.625709 |
|
Target: 5'- uCGCCGuCGUCGUCgGugccGGCCUcgUCGg -3' miRNA: 3'- cGCGGC-GUAGCAGgCu---UCGGAuaAGC- -5' |
|||||||
| 24549 | 3' | -53.6 | NC_005264.1 | + | 66609 | 0.77 | 0.485617 |
|
Target: 5'- uGCGCCGCGUUG-CCGgcGCCg--UCGc -3' miRNA: 3'- -CGCGGCGUAGCaGGCuuCGGauaAGC- -5' |
|||||||
| 24549 | 3' | -53.6 | NC_005264.1 | + | 5157 | 1.12 | 0.003487 |
|
Target: 5'- cGCGCCGCAUCGUCCGAAGCCUAUUCGg -3' miRNA: 3'- -CGCGGCGUAGCAGGCUUCGGAUAAGC- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home