Results 41 - 60 of 266 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 730 | 0.74 | 0.121521 |
Target: 5'- gGGCg-GCuuUGCCgACAACGCCGGCCa -3' miRNA: 3'- -UCGgaUGcgGCGGaUGUUGCGGCCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 20190 | 0.74 | 0.11495 |
Target: 5'- cGCCUuguCGUCGCCcucggucuugGCAGCGCCcgcGGCCg -3' miRNA: 3'- uCGGAu--GCGGCGGa---------UGUUGCGG---CCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 17099 | 0.74 | 0.113993 |
Target: 5'- cGGCCUggacaaucccggcgACGagCGCCggugGCAGgGCCGGCCg -3' miRNA: 3'- -UCGGA--------------UGCg-GCGGa---UGUUgCGGCCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 29032 | 0.74 | 0.11495 |
Target: 5'- cGCaacgAUGCCGCCUACAaccgcGCGCUGGgCa -3' miRNA: 3'- uCGga--UGCGGCGGAUGU-----UGCGGCCgG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 8386 | 0.74 | 0.11495 |
Target: 5'- cGGCCUcGCGCUGgCUGCGuagccaGUCGGCCa -3' miRNA: 3'- -UCGGA-UGCGGCgGAUGUug----CGGCCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 30997 | 0.74 | 0.11495 |
Target: 5'- cGCCUuauCGgCGaCCUGC-ACGCCGGCUc -3' miRNA: 3'- uCGGAu--GCgGC-GGAUGuUGCGGCCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 37294 | 0.73 | 0.147359 |
Target: 5'- cGCCUGCGCgGCacguUGCAguucaacgGCGCCaGCCg -3' miRNA: 3'- uCGGAUGCGgCGg---AUGU--------UGCGGcCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 19924 | 0.73 | 0.143382 |
Target: 5'- cAGCUUGuCGCCGCCgaACuccuUGUCGGCCg -3' miRNA: 3'- -UCGGAU-GCGGCGGa-UGuu--GCGGCCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 35821 | 0.73 | 0.151435 |
Target: 5'- cGGCggaCUACGCCauGCuCUACGuggUGCCGGCCg -3' miRNA: 3'- -UCG---GAUGCGG--CG-GAUGUu--GCGGCCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 17057 | 0.73 | 0.151435 |
Target: 5'- gGGCUUcUGgCGCCUGCccgGugGCCGGCUa -3' miRNA: 3'- -UCGGAuGCgGCGGAUG---UugCGGCCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 41805 | 0.73 | 0.143382 |
Target: 5'- cGCCggACGCCGUgUccACGGCGCUgcuGGCCg -3' miRNA: 3'- uCGGa-UGCGGCGgA--UGUUGCGG---CCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 33207 | 0.73 | 0.143382 |
Target: 5'- cGCCgggcGCGCCGCagaACGuGCGCCGcGCCg -3' miRNA: 3'- uCGGa---UGCGGCGga-UGU-UGCGGC-CGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 5121 | 0.73 | 0.135722 |
Target: 5'- cGGCUgGCGCCGUugaaCUGCAACGUgccgcgcaggCGGCCg -3' miRNA: 3'- -UCGGaUGCGGCG----GAUGUUGCG----------GCCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 11997 | 0.73 | 0.147359 |
Target: 5'- uGGCCUuuuccACGUCgGCCaGCAGCGC-GGCCg -3' miRNA: 3'- -UCGGA-----UGCGG-CGGaUGUUGCGgCCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 2141 | 0.72 | 0.164286 |
Target: 5'- cAGCCggucaaccGCGCCGCCgUAC-ACGuuGGCg -3' miRNA: 3'- -UCGGa-------UGCGGCGG-AUGuUGCggCCGg -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 40541 | 0.72 | 0.168783 |
Target: 5'- uGCUguuCGCCcacCCggcCAGCGCCGGCCa -3' miRNA: 3'- uCGGau-GCGGc--GGau-GUUGCGGCCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 3539 | 0.72 | 0.168783 |
Target: 5'- uGCCguuccagGCGCCGCCgaauagcGCAGCaGCgGGCUg -3' miRNA: 3'- uCGGa------UGCGGCGGa------UGUUG-CGgCCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 28524 | 0.72 | 0.17339 |
Target: 5'- uGCCgGCGCUGCUUguugaacggcACGAccuugcggcCGCCGGCCa -3' miRNA: 3'- uCGGaUGCGGCGGA----------UGUU---------GCGGCCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 38057 | 0.72 | 0.17339 |
Target: 5'- cGCCUggcuGCGCaucCGCCUGC--CGuCCGGCCg -3' miRNA: 3'- uCGGA----UGCG---GCGGAUGuuGC-GGCCGG- -5' |
|||||||
26477 | 3' | -59.7 | NC_005357.1 | + | 23198 | 0.72 | 0.162958 |
Target: 5'- gGGCCUgACGCCGCgCUuCAACaGCCuguccgcggagaacGGCCa -3' miRNA: 3'- -UCGGA-UGCGGCG-GAuGUUG-CGG--------------CCGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home